RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TRMT1LQ7Z2T5 733 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 C12orf56Q8IXR9 622 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 TMEM40Q8WWA1 233 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 SYAP1Q96A49 352 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 VWCEQ96DN2 955 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 ACCSQ96QU6 501 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 FIZ1Q96SL8 496 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 AGO3Q9H9G7 860 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 MRPL44Q9H9J2 332 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 TOPORSQ9NS56 1045 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 EXOC1Q9NV70 894 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 TBX20Q9UMR3 447 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 PIN4Q9Y237 131 aaKnown RBP9.29□□□□□ -0.92
PDGFC-205ENST00000506880 PCDHB7Q9Y5E2 793 aa9.29□□□□□ -0.92
PDGFC-205ENST00000506880 K7ENM7 598 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 MAPK13O15264 365 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 CLDN3O15551 220 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 TSPAN1O60635 241 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 RB1P06400 928 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 ARF4P18085 180 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-205ENST00000506880 MCL1Q07820 350 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 DPYDQ12882 1025 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 COASYQ13057 564 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 STIM1Q13586 685 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 SURF1Q15526 300 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 LONRF3Q496Y0 759 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 ATF7IP2Q5U623 682 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 MPZL3Q6UWV2 235 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 HS2ST1Q7LGA3 356 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 DEFB128Q7Z7B8 93 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 USP37Q86T82 979 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 ZNF598Q86UK7 904 aaKnown RBP9.28□□□□□ -0.92
PDGFC-205ENST00000506880 ECHDC2Q86YB7 292 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 SLC9A9Q8IVB4 645 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 GPR65Q8IYL9 337 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 GUF1Q8N442 669 aaKnown RBP9.28□□□□□ -0.92
PDGFC-205ENST00000506880 ZNF507Q8TCN5 953 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 ACO2Q99798 780 aaKnown RBP9.28□□□□□ -0.92
PDGFC-205ENST00000506880 ADAM2Q99965 735 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 TRIM6Q9C030 488 aaPredicted RBP9.28□□□□□ -0.92
PDGFC-205ENST00000506880 TMEM117Q9H0C3 514 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 PTPRHQ9HD43 1115 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 GPRC5CQ9NQ84 441 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 AAASQ9NRG9 546 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 FAM105AQ9NUU6 356 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 MSRAQ9UJ68 235 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 LRFN2Q9ULH4 789 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 GINS2Q9Y248 185 aa9.28□□□□□ -0.92
PDGFC-205ENST00000506880 TDRD15B5MCY1 1934 aaKnown RBP9.28□□□□□ -0.92
PDGFC-205ENST00000506880 PDCD11Q14690 1871 aaKnown RBP9.28□□□□□ -0.92
PDGFC-205ENST00000506880 PTPRSQ13332 1948 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 PDXKO00764 312 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 HNRNPDLO14979 420 aaKnown RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 XPOTO43592 962 aaKnown RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 DGKIO75912 1065 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 LETM1O95202 739 aaPredicted RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 C1RP00736 705 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 RPN1P04843 607 aaKnown RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 ADRB2P07550 413 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 IDEP14735 1019 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 PPM1AP35813 382 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 GRM5P41594 1212 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 TMEM62Q0P6H9 643 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 NOLC1Q14978 699 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 SHHQ15465 462 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 GLB1LQ6UWU2 654 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 EPM2AIP1Q7L775 607 aaPredicted RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 SFR1Q86XK3 245 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 HERC6Q8IVU3 1022 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 ABI1Q8IZP0 508 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 LRRC15Q8TF66 581 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 BSNDQ8WZ55 320 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 CLP1Q92989 425 aaKnown RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 SMARCE1Q969G3 411 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 ZNF689Q96CS4 500 aaPredicted RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 PLIN2Q99541 437 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 SH2D3AQ9BRG2 576 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 CCDC94Q9BW85 323 aaPredicted RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 GBP3Q9H0R5 595 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 TMX1Q9H3N1 280 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 RC3H2Q9HBD1 1191 aaKnown RBP9.27□□□□□ -0.93
PDGFC-205ENST00000506880 SLC38A7Q9NVC3 462 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 LMCD1Q9NZU5 365 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 DERAQ9Y315 318 aa9.27□□□□□ -0.93
PDGFC-205ENST00000506880 TRIP11Q15643 1979 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 NLRC5Q86WI3 1866 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 A0A0B4J269 797 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 ZBBXA8MT70 800 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 C5orf67F2Z3F1 127 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 OGTO15294 1046 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 SLC16A4O15374 487 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 KLRC4O43908 158 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 PRPF40AO75400 957 aaKnown RBP9.26□□□□□ -0.93
PDGFC-205ENST00000506880 NR1I2O75469 434 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 GCNT3O95395 438 aa9.26□□□□□ -0.93
PDGFC-205ENST00000506880 CAVIN2O95810 425 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms