RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 RNF169Q8NCN4 708 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 SPATA20Q8TB22 786 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 SEPT8Q92599 483 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 ADAM2Q99965 735 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 STRA6Q9BX79 667 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 HAPLN2Q9GZV7 340 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 CXCL16Q9H2A7 254 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 C17orf75Q9HAS0 396 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 KIAA1468Q9P260 1216 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 HES2Q9Y543 173 aa9.71□□□□□ -0.86
SCAMP1-202ENST00000506858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 C2orf72A6NCS6 295 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 ZBBXA8MT70 800 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 ACKR2O00590 384 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 ENPP3O14638 875 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 GPR182O15218 404 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 CLIC2O15247 247 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 ERLIN2O94905 339 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 RHOBTB3O94955 611 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 UPP2O95045 317 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 SMC2O95347 1197 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 GATMP50440 423 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 OSTNP61366 133 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 DEFB103AP81534 67 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 GTF2BQ00403 316 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 CDC42EP1Q00587 391 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 DSC3Q14574 896 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 SHHQ15465 462 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 ZBTB41Q5SVQ8 909 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 UBXN11Q5T124 520 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 L1TD1Q5T7N2 865 aaKnown RBP9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 KLHL10Q6JEL2 608 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 EPM2AIP1Q7L775 607 aaPredicted RBP9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 CEP120Q8N960 986 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 LPPQ93052 612 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 BICD1Q96G01 975 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 EEF2KMTQ96G04 330 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 ACO2Q99798 780 aaKnown RBP9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 APOL6Q9BWW8 343 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 C2orf40Q9H1Z8 148 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 TMEM134Q9H6X4 195 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 AGPAT5Q9NUQ2 364 aa9.7□□□□□ -0.86
SCAMP1-202ENST00000506858 GRXCR1A8MXD5 290 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 NPTXRO95502 500 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 FGBP02675 491 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 SFPQP23246 707 aaKnown RBP eCLIP9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 PRCPP42785 496 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 EFNA5P52803 228 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 STX17P56962 302 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 POU5F1BQ06416 359 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 STRN3Q13033 797 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 PPIGQ13427 754 aaKnown RBP eCLIP9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 MORC3Q14149 939 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 KCNB1Q14721 858 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 CCDC183Q5T5S1 534 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 ATF7IP2Q5U623 682 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 TWF2Q6IBS0 349 aaKnown RBP9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 TMEM192Q8IY95 271 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 RPUSD2Q8IZ73 545 aaKnown RBP9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 SYCP3Q8IZU3 236 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 TMEM130Q8N3G9 435 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 ZNF507Q8TCN5 953 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 NOC3LQ8WTT2 800 aaKnown RBP9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 TCHPQ9BT92 498 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 NFKBIZQ9BYH8 718 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 PCIF1Q9H4Z3 704 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 PDZD7Q9H5P4 517 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 OLFML3Q9NRN5 406 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 PRMT7Q9NVM4 692 aaPredicted RBP9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 ANKFY1Q9P2R3 1169 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 SEL1LQ9UBV2 794 aa9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 HOOK1Q9UJC3 728 aaKnown RBP9.69□□□□□ -0.86
SCAMP1-202ENST00000506858 ZMYM2Q9UBW7 1377 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 GOLGA8IPA6NC78 632 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 GOLGA8JA6NMD2 632 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 TGFB1I1O43294 461 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 RPLP2P05387 115 aaKnown RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 MYL1P05976 194 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 ADSSP30520 456 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 MATR3P43243 847 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 AFF1P51825 1210 aaKnown RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 PMS1P54277 932 aaKnown RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 KLHL40Q2TBA0 621 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 CNKSR3Q6P9H4 555 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 ELOA2Q8IYF1 753 aaPredicted RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 MYOCDQ8IZQ8 938 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 CCDC47Q96A33 483 aaKnown RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 CCDC34Q96HJ3 373 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 FAM84AQ96KN4 292 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 GSDMAQ96QA5 445 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 ACCSQ96QU6 501 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 GDF15Q99988 308 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 CBWD1Q9BRT8 395 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 MRPL4Q9BYD3 311 aaKnown RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 UBE2OQ9C0C9 1292 aaKnown RBP9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 SEMA6BQ9H3T3 888 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 KLK14Q9P0G3 267 aa9.68□□□□□ -0.86
SCAMP1-202ENST00000506858 PHLPP2Q6ZVD8 1323 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms