RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SMC2O95347 1197 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 HOXD13P35453 343 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 DEFB103AP81534 67 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 KCNA1Q09470 495 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 CAMK4Q16566 473 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 BMT2Q1RMZ1 405 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 ATF7IP2Q5U623 682 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 SLC27A1Q6PCB7 646 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 TDHQ8IZJ6 230 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 KIAA0895Q8NCT3 520 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 PHOSPHO2Q8TCD6 241 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 SCFD1Q8WVM8 642 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 SMARCE1Q969G3 411 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 TOP1MTQ969P6 601 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 CCDC47Q96A33 483 aaKnown RBP14.1□□□□□ -0.15
TCOF1-210ENST00000506767 TARS2Q9BW92 718 aaKnown RBP14.1□□□□□ -0.15
TCOF1-210ENST00000506767 MTIF3Q9H2K0 278 aaKnown RBP14.1□□□□□ -0.15
TCOF1-210ENST00000506767 ELAC1Q9H777 363 aaKnown RBP14.1□□□□□ -0.15
TCOF1-210ENST00000506767 TTC3P53804 2025 aa14.1□□□□□ -0.15
TCOF1-210ENST00000506767 A0A1W2PPC1 479 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 ZBBXA8MT70 800 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 PRPF6O94906 941 aaKnown RBP14.09□□□□□ -0.15
TCOF1-210ENST00000506767 AMHP03971 560 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 PTMSP20962 102 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 KCNJ6P48051 423 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 EEF1DP3Q658K8 133 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 TWF2Q6IBS0 349 aaKnown RBP14.09□□□□□ -0.15
TCOF1-210ENST00000506767 SLC39A4Q6P5W5 647 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 STXBP4Q6ZWJ1 553 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 MRPL10Q7Z7H8 261 aaKnown RBP14.09□□□□□ -0.15
TCOF1-210ENST00000506767 ZNF598Q86UK7 904 aaKnown RBP14.09□□□□□ -0.15
TCOF1-210ENST00000506767 CDR2LQ86X02 465 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-210ENST00000506767 ECHDC2Q86YB7 292 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 RNPC3Q96LT9 517 aaKnown RBP14.09□□□□□ -0.15
TCOF1-210ENST00000506767 ACCSQ96QU6 501 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 SLC9A7Q96T83 725 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 EIF2AQ9BY44 585 aaKnown RBP14.09□□□□□ -0.15
TCOF1-210ENST00000506767 NUP62CLQ9H1M0 184 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 TMEM206Q9H813 350 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 FAM105AQ9NUU6 356 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 RMND1Q9NWS8 449 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 KIAA1468Q9P260 1216 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 STYXL1Q9Y6J8 313 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 SLC4A7Q9Y6M7 1214 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 UBE4BO95155 1302 aa14.09□□□□□ -0.15
TCOF1-210ENST00000506767 TOM1L1O75674 476 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 EOMESO95936 686 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 SKIP12755 728 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 ATF7P17544 494 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-210ENST00000506767 RAB27AP51159 221 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 COBLL1Q53SF7 1204 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 ZNF658Q5TYW1 1059 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-210ENST00000506767 SMG8Q8ND04 991 aaKnown RBP14.08□□□□□ -0.16
TCOF1-210ENST00000506767 ZBTB45Q96K62 511 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-210ENST00000506767 HAPLN2Q9GZV7 340 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 IKZF4Q9H2S9 585 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 TMEM161AQ9NX61 479 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 MAN1B1Q9UKM7 699 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 EXOC7Q9UPT5 735 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 GDAQ9Y2T3 454 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 PCDHB2Q9Y5E7 798 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 ZMYM2Q9UBW7 1377 aa14.08□□□□□ -0.16
TCOF1-210ENST00000506767 ANKRD63C9JTQ0 380 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 HNRNPDLO14979 420 aaKnown RBP14.07□□□□□ -0.16
TCOF1-210ENST00000506767 NPTXRO95502 500 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 BMP6P22004 513 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 LIG4P49917 911 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 MCL1Q07820 350 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 MORC3Q14149 939 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 DCAF4L1Q3SXM0 396 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 MPZL3Q6UWV2 235 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 RBM43Q6ZSC3 357 aaKnown RBP14.07□□□□□ -0.16
TCOF1-210ENST00000506767 NPAS4Q8IUM7 802 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 MYOCDQ8IZQ8 938 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 BICD1Q96G01 975 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 GTPBP4Q9BZE4 634 aaKnown RBP14.07□□□□□ -0.16
TCOF1-210ENST00000506767 CDT1Q9H211 546 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-210ENST00000506767 IPPQ9Y573 584 aa14.07□□□□□ -0.16
TCOF1-210ENST00000506767 A0A0B4J269 797 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 TISP43B9A030 160 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 CLDN3O15551 220 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 TGFB1I1O43294 461 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 GJB5O95377 273 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 STAG3L1P0CL83 205 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 MCF2P10911 925 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 ATP2A2P16615 1042 aaKnown RBP14.06□□□□□ -0.16
TCOF1-210ENST00000506767 ADSSP30520 456 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 HTRA4P83105 476 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-210ENST00000506767 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
TCOF1-210ENST00000506767 TMEM132AQ24JP5 1023 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 KLHL40Q2TBA0 621 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 ZNF568Q3ZCX4 644 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 TMCO2Q7Z6W1 182 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-210ENST00000506767 HERC6Q8IVU3 1022 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 GUF1Q8N442 669 aaKnown RBP14.06□□□□□ -0.16
TCOF1-210ENST00000506767 TRIML1Q8N9V2 468 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-210ENST00000506767 KCTD10Q9H3F6 313 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms