RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TLR10Q9BXR5 811 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 RRAGCQ9HB90 399 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 PTPRJQ12913 1337 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 TACC1O75410 805 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 STAT1P42224 750 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 NLRP11P59045 1033 aaKnown RBP13.24□□□□□ -0.29
LIN54-206ENST00000506560 CAPSQ13938 189 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 CELF3Q5SZQ8 465 aaKnown RBP13.24□□□□□ -0.29
LIN54-206ENST00000506560 CCDC62Q6P9F0 684 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 PNMA8AQ86V59 439 aaPredicted RBP13.24□□□□□ -0.29
LIN54-206ENST00000506560 KREMEN1Q96MU8 473 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 PTPN18Q99952 460 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 NIFKQ9BYG3 293 aaKnown RBP13.24□□□□□ -0.29
LIN54-206ENST00000506560 NENFQ9UMX5 172 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 EXOC7Q9UPT5 735 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 TXNP10599 105 aaKnown RBP13.23□□□□□ -0.29
LIN54-206ENST00000506560 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 TRIM58Q8NG06 486 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 SLC7A3Q8WY07 619 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 ZNF516Q92618 1163 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 SPATA33Q96N06 139 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 SYT11Q9BT88 431 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 HARSP12081 509 aaKnown RBP13.23□□□□□ -0.29
LIN54-206ENST00000506560 ADORA2AP29274 412 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 CYP24A1Q07973 514 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 NAB2Q15742 525 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 WHAMMP3Q1A5X7 153 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 CEP112Q8N8E3 955 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 PPP1R13LQ8WUF5 828 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
LIN54-206ENST00000506560 DHX38Q92620 1227 aaKnown RBP13.23□□□□□ -0.29
LIN54-206ENST00000506560 MS4A14Q96JA4 679 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 FBXL18Q96ME1 805 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 C17orf75Q9HAS0 396 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 SNX12Q9UMY4 172 aa13.23□□□□□ -0.29
LIN54-206ENST00000506560 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 GRID2IPA4D2P6 1211 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 NOP56O00567 594 aaKnown RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 CELF2O95319 508 aaKnown RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 TGFB3P10600 412 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 USP8P40818 1118 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 LIG4P49917 911 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 RTP1P59025 263 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 CREG2Q8IUH2 290 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 DHX37Q8IY37 1157 aaKnown RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 TMEM174Q8WUU8 243 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 TATDN2Q93075 761 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 CHORDC1Q9UHD1 332 aaPredicted RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 C2orf54Q08AI8 447 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 CRELD2Q6UXH1 353 aaPredicted RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 CDR2LQ86X02 465 aaPredicted RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 GPD1LQ8N335 351 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 PPM1KQ8N3J5 372 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 GPRC5AQ8NFJ5 357 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 SLC30A5Q8TAD4 765 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 DEPTORQ8TB45 409 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 RABGGTAQ92696 567 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 MFSD14AQ96MC6 490 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 NOX5Q96PH1 765 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 PPP1R16BQ96T49 567 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 MAF1Q9H063 256 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 PDE11AQ9HCR9 933 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 SEPT11Q9NVA2 429 aaKnown RBP13.22□□□□□ -0.29
LIN54-206ENST00000506560 JRKLQ9Y4A0 524 aa13.22□□□□□ -0.29
LIN54-206ENST00000506560 FERP16591 822 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 ABCB4P21439 1286 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 PLCB4Q15147 1175 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
LIN54-206ENST00000506560 TMEM130Q8N3G9 435 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 HVCN1Q96D96 273 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 OSBPL9Q96SU4 736 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 MROH8Q9H579 483 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 AZI2Q9H6S1 392 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
LIN54-206ENST00000506560 PLXNA1Q9UIW2 1896 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 ANO9A1A5B4 782 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 K7ERI5 159 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 CSDE1O75534 798 aaKnown RBP13.21□□□□□ -0.29
LIN54-206ENST00000506560 ZMYND10O75800 440 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 RNASE9P60153 205 aaKnown RBP13.21□□□□□ -0.29
LIN54-206ENST00000506560 TAF3Q5VWG9 929 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.29
LIN54-206ENST00000506560 OSGEPQ9NPF4 335 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 HYOU1Q9Y4L1 999 aa13.21□□□□□ -0.29
LIN54-206ENST00000506560 MAFO75444 373 aaPredicted RBP13.2□□□□□ -0.3
LIN54-206ENST00000506560 SGPL1O95470 568 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 GALCP54803 685 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
LIN54-206ENST00000506560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms