RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 CPB2Q96IY4 423 aa12.67□□□□□ -0.38
SIL1-208ENST00000505945 GAD1Q99259 594 aa12.67□□□□□ -0.38
SIL1-208ENST00000505945 HSD17B14Q9BPX1 270 aa12.67□□□□□ -0.38
SIL1-208ENST00000505945 EIF2AK1Q9BQI3 630 aaKnown RBP12.67□□□□□ -0.38
SIL1-208ENST00000505945 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
SIL1-208ENST00000505945 USTQ9Y2C2 406 aa12.67□□□□□ -0.38
SIL1-208ENST00000505945 PRG3Q9Y2Y8 225 aaPredicted RBP12.67□□□□□ -0.38
SIL1-208ENST00000505945 IPPQ9Y573 584 aa12.67□□□□□ -0.38
SIL1-208ENST00000505945 A0A087WWV3 80 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 ARL5CA6NH57 179 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 INO80B-WBP1J3KQ70 363 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 OR1G1P47890 313 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 NCBP1Q09161 790 aaKnown RBP12.66□□□□□ -0.38
SIL1-208ENST00000505945 MXD4Q14582 209 aaPredicted RBP12.66□□□□□ -0.38
SIL1-208ENST00000505945 ANKRD1Q15327 319 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 ME3Q16798 604 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 COLGALT2Q8IYK4 626 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 ZFP42Q96MM3 310 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 TTC12Q9H892 705 aaPredicted RBP12.66□□□□□ -0.38
SIL1-208ENST00000505945 SFXN1Q9H9B4 322 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 UBN1Q9NPG3 1134 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 MARCH5Q9NX47 278 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 MIOSQ9NXC5 875 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 STK39Q9UEW8 545 aa12.66□□□□□ -0.38
SIL1-208ENST00000505945 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 F8W810 466 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 H0Y858 1186 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 WNT7AO00755 349 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 LARGE1O95461 756 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 SOD2P04179 222 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 MYBP10242 640 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 AXLP30530 894 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 ARL2P36404 184 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 MLH1P40692 756 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 TXKP42681 527 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 SCNN1GP51170 649 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 FOSBP53539 338 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 CAPSQ13938 189 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 TFDP1Q14186 410 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 CALCRLQ16602 461 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 NOTUMQ6P988 496 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 ASAP3Q8TDY4 903 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 PIGOQ8TEQ8 1089 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 ATOH1Q92858 354 aaPredicted RBP12.65□□□□□ -0.38
SIL1-208ENST00000505945 RPS6KC1Q96S38 1066 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 APOL6Q9BWW8 343 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 CSRNP2Q9H175 543 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 BRMS1Q9HCU9 246 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 ANKEF1Q9NU02 776 aa12.65□□□□□ -0.38
SIL1-208ENST00000505945 ARID2Q68CP9 1835 aa12.65□□□□□ -0.39
SIL1-208ENST00000505945 INPPL1O15357 1258 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 TEX28O15482 410 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 B4GALT5O43286 388 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 DGAT1O75907 488 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 LYPLA2O95372 231 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 URODP06132 367 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 ARF4P18085 180 aaPredicted RBP12.64□□□□□ -0.39
SIL1-208ENST00000505945 GLRA2P23416 452 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 RARRES1P49788 294 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 ANAPC15P60006 121 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 MBTD1Q05BQ5 628 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 POU5F1BQ06416 359 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 DSC1Q08554 894 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 PCBP1Q15365 356 aaKnown RBP eCLIP12.64□□□□□ -0.39
SIL1-208ENST00000505945 AMHR2Q16671 573 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 KIAA0319Q5VV43 1072 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 CCDC149Q6ZUS6 474 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 OTOP3Q7RTS5 596 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
SIL1-208ENST00000505945 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
SIL1-208ENST00000505945 TMEM105Q8N8V8 129 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
SIL1-208ENST00000505945 ACSF2Q96CM8 615 aaPredicted RBP12.64□□□□□ -0.39
SIL1-208ENST00000505945 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 MAN1C1Q9NR34 630 aa12.64□□□□□ -0.39
SIL1-208ENST00000505945 PTPRZ1P23471 2315 aaPredicted RBP12.63□□□□□ -0.39
SIL1-208ENST00000505945 USP34Q70CQ2 3546 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 CCDC195A0A1B0GUA6 201 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 GALR2O43603 387 aaPredicted RBP12.63□□□□□ -0.39
SIL1-208ENST00000505945 NEMFO60524 1076 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 JAK2O60674 1132 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 EFEMP2O95967 443 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 ADH1AP07327 375 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 AKAP5P24588 427 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 C15orf39Q6ZRI6 1047 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 MAEAQ7L5Y9 396 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 DIS3L2Q8IYB7 885 aaKnown RBP12.63□□□□□ -0.39
SIL1-208ENST00000505945 RNF168Q8IYW5 571 aaPredicted RBP12.63□□□□□ -0.39
SIL1-208ENST00000505945 GSTCDQ8NEC7 633 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 GTF3C6Q969F1 213 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 B3GALT6Q96L58 329 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 CCDC43Q96MW1 224 aaKnown RBP12.63□□□□□ -0.39
SIL1-208ENST00000505945 MTMR9Q96QG7 549 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 COLEC11Q9BWP8 271 aa12.63□□□□□ -0.39
SIL1-208ENST00000505945 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
SIL1-208ENST00000505945 IRF2BPLQ9H1B7 796 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms