RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TCEAL1Q15170 157 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 ANKRD13CQ8N6S4 541 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 NOA1Q8NC60 698 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 TCP11Q8WWU5 503 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 PBKQ96KB5 322 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 CAPZA3Q96KX2 299 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 UBE2TQ9NPD8 197 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 ASB14A6NK59 587 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 LGR5O75473 907 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 ATP4AP20648 1035 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 FAM193AP78312 1265 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 MOGSQ13724 837 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 PLPPR4Q7Z2D5 763 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 CBWD2Q8IUF1 395 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 FBXL13Q8NEE6 735 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 BBXQ8WY36 941 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 CTNNBL1Q8WYA6 563 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 RFFLQ8WZ73 363 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 CLMNQ96JQ2 1002 aa18.7■□□□□ 0.58
TRAPPC11-204ENST00000505676 TISP43B9A030 160 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 EFNA5P52803 228 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 CLDN10P78369 228 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 CCNA1P78396 465 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 GPS2Q13227 327 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 LONRF2Q1L5Z9 754 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 SLC39A4Q6P5W5 647 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 HDXQ7Z353 690 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 U2AF1L4Q8WU68 220 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 NT5C1BQ96P26 610 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 CEP89Q96ST8 783 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 RBPJLQ9UBG7 517 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 ADGRA3Q8IWK6 1321 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 GGPS1O95749 300 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 RHOXF2BP0C7M4 288 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 HADHBP55084 474 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 PSMD6Q15008 389 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 CLUL1Q15846 466 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 SLFN11Q7Z7L1 901 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 RHOT2Q8IXI1 618 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 SPATA4Q8NEY3 305 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 DHX38Q92620 1227 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 AGPAT1Q99943 283 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 RHOXF2Q9BQY4 288 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 KIFC3Q9BVG8 833 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 SELENOOQ9BVL4 669 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 PACSIN1Q9BY11 444 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 ACBD3Q9H3P7 528 aa18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 DIS3Q9Y2L1 958 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-204ENST00000505676 ANKRD62A6NC57 917 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 LRRIQ3A6PVS8 624 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 MAFO75444 373 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 RPS6KA1Q15418 735 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 IER5Q5VY09 327 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 NFRKBQ6P4R8 1299 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 TPCN2Q8NHX9 752 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 LNX1Q8TBB1 728 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 PLEKHO2Q8TD55 490 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 PNKPQ96T60 521 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 SIP14410 1827 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 K7ERI5 159 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 TBC1D8O95759 1140 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 NOP2P46087 812 aaKnown RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 FKBP1BP68106 108 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 BEND6Q5SZJ8 279 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 CELF3Q5SZQ8 465 aaKnown RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 GPAT2Q6NUI2 795 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 TRMT1LQ7Z2T5 733 aaKnown RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 FAM71AQ8IYT1 594 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 LRRC57Q8N9N7 239 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 SHC3Q92529 594 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 TAF1DQ9H5J8 278 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 RAB20Q9NX57 234 aa18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 SUCLA2Q9P2R7 463 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-204ENST00000505676 FOXN3O00409 490 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 GZMAP12544 262 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 GLRA2P23416 452 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 TCF7P36402 384 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 GCNT1Q02742 428 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 MXD4Q14582 209 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 ARHGAP44Q17R89 818 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 ZPBP2Q6X784 338 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 TAS1R3Q7RTX0 852 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 GPIHBP1Q8IV16 184 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 COG1Q8WTW3 980 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 PSPC1Q8WXF1 523 aaKnown RBP18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 SAAL1Q96ER3 474 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 PCYT2Q99447 389 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 EPC1Q9H2F5 836 aa18.67■□□□□ 0.58
TRAPPC11-204ENST00000505676 GOLGA8IPA6NC78 632 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 GOLGA8JA6NMD2 632 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 PDE2AO00408 941 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 ZNF185O15231 689 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 AP3M2P53677 418 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 GALCP54803 685 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 OLIG1Q8TAK6 271 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 C2orf40Q9H1Z8 148 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 NOP56O00567 594 aaKnown RBP18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 MAP2K7O14733 419 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 KIF4AO95239 1232 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms