RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MTFR1Q15390 333 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 TRIM71Q2Q1W2 868 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 CCDC40Q4G0X9 1142 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 EEF1DP3Q658K8 133 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 TMEM139Q8IV31 216 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 SYCP3Q8IZU3 236 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 SLC43A3Q8NBI5 491 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 CACTINQ8WUQ7 758 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 TMEM40Q8WWA1 233 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 DHX38Q92620 1227 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 SAAL1Q96ER3 474 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 PPP1R16BQ96T49 567 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 NOC4LQ9BVI4 516 aaKnown RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 C2orf40Q9H1Z8 148 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 MAGEC2Q9UBF1 373 aaPredicted RBP11.36□□□□□ -0.59
TPM3-217ENST00000504663 KCNG1Q9UIX4 513 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 EXOC7Q9UPT5 735 aa11.36□□□□□ -0.59
TPM3-217ENST00000504663 GOLGA8IPA6NC78 632 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 GOLGA8JA6NMD2 632 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 K7ERI5 159 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 ACKR2O00590 384 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 CSDE1O75534 798 aaKnown RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 NOL4O94818 638 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 EPB41P11171 864 aaKnown RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 PYGBP11216 843 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 FECHP22830 423 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 DNM2P50570 870 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 FXR1P51114 621 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM3-217ENST00000504663 ACLYP53396 1101 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 NLRP11P59045 1033 aaKnown RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 CCZ1BP86790 482 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 CCZ1P86791 482 aaPredicted RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 MGAT3Q09327 533 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 BFSP1Q12934 665 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 TFDP1Q14186 410 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 ARHGEF6Q15052 776 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 SPECC1LQ69YQ0 1117 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 TSHZ1Q6ZSZ6 1077 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 CCDC186Q7Z3E2 898 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 SERINC5Q86VE9 423 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 TC2NQ8N9U0 490 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 MFSD14AQ96MC6 490 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 TSEN34Q9BSV6 310 aaKnown RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 METTL14Q9HCE5 456 aaKnown RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 IMPACTQ9P2X3 320 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 ARMCX3Q9UH62 379 aaPredicted RBP11.35□□□□□ -0.59
TPM3-217ENST00000504663 AKT3Q9Y243 479 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 TANC1Q9C0D5 1861 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
TPM3-217ENST00000504663 TSPAN1O60635 241 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 EXOC3O60645 756 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 TRIM49P0CI25 452 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 TRIM49CP0CI26 452 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 PHKA2P46019 1235 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 LIG4P49917 911 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 UBXN1Q04323 297 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 ENPEPQ07075 957 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 MCL1Q07820 350 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 CYP24A1Q07973 514 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 PPP3CAQ08209 521 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 TMEM62Q0P6H9 643 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 KCNH2Q12809 1159 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 LRMPQ12912 555 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 SYCP1Q15431 976 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 SNRNP35Q16560 246 aaKnown RBP11.34□□□□□ -0.59
TPM3-217ENST00000504663 KIZQ2M2Z5 673 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 CBWD6Q4V339 395 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 HS1BP3Q53T59 392 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 CBWD3Q5JTY5 395 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 CBWD5Q5RIA9 395 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 TRAF7Q6Q0C0 670 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 RPAINQ86UA6 219 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 ZBTB8OSQ8IWT0 167 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 GPD1LQ8N335 351 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 C7orf31Q8N865 590 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 PCSK9Q8NBP7 692 aaKnown RBP11.34□□□□□ -0.59
TPM3-217ENST00000504663 ANKRD20A12PQ8NF67 263 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 DNAJB3Q8WWF6 145 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 FAM84AQ96KN4 292 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 ZNF830Q96NB3 372 aaPredicted RBP11.34□□□□□ -0.59
TPM3-217ENST00000504663 MAP7D2Q96T17 732 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 MRPL4Q9BYD3 311 aaKnown RBP11.34□□□□□ -0.59
TPM3-217ENST00000504663 OSBPL7Q9BZF2 842 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 CDT1Q9H211 546 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 GANQ9H2C0 597 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 TMX1Q9H3N1 280 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 PDZD7Q9H5P4 517 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 SPC25Q9HBM1 224 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 SIX2Q9NPC8 291 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 PRMT7Q9NVM4 692 aaPredicted RBP11.34□□□□□ -0.59
TPM3-217ENST00000504663 AJAP1Q9UKB5 411 aaPredicted RBP11.34□□□□□ -0.59
TPM3-217ENST00000504663 PHF24Q9UPV7 400 aa11.34□□□□□ -0.59
TPM3-217ENST00000504663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.34□□□□□ -0.59
TPM3-217ENST00000504663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms