RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TTC28Q96AY4 2481 aa15.75■□□□□ 0.11
HOXC9-202ENST00000504557 SPTBN5Q9NRC6 3674 aaKnown RBP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 SFI1A8K8P3 1242 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 B4GALT3O60512 393 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 DDHD2O94830 711 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 NAMPTP43490 491 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 SLC11A1P49279 550 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 PEX3P56589 373 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 UBE3AQ05086 875 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 GRIN1Q05586 938 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 PPP2R5AQ15172 486 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 PCBP1Q15365 356 aaKnown RBP eCLIP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 MAPK6Q16659 721 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 LEXMQ3ZCV2 418 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 CDCA2Q69YH5 1023 aaPredicted RBP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 LLGL2Q6P1M3 1020 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 SLC27A1Q6PCB7 646 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 MRPL10Q7Z7H8 261 aaKnown RBP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 TMEM173Q86WV6 379 aaPredicted RBP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 KIFAP3Q92845 792 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 ZFP42Q96MM3 310 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 NFKBIZQ9BYH8 718 aa15.74■□□□□ 0.11
HOXC9-202ENST00000504557 BARX2Q9UMQ3 279 aaPredicted RBP15.74■□□□□ 0.11
HOXC9-202ENST00000504557 CNTNAP2Q9UHC6 1331 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 ARL5CA6NH57 179 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 HIDE1A8MVS5 230 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 TNFRSF10AO00220 468 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 TBX10O75333 385 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 MARCKSP29966 332 aaPredicted RBP15.73■□□□□ 0.11
HOXC9-202ENST00000504557 LTBRP36941 435 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 UBA7P41226 1012 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 SCNN1GP51170 649 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 PLCB3Q01970 1234 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 SPECC1Q5M775 1068 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 RINT1Q6NUQ1 792 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 HACE1Q8IYU2 909 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 CNNM3Q8NE01 707 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 BCL7CQ8WUZ0 217 aaPredicted RBP15.73■□□□□ 0.11
HOXC9-202ENST00000504557 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 CCDC51Q96ER9 411 aa15.73■□□□□ 0.11
HOXC9-202ENST00000504557 PRG3Q9Y2Y8 225 aaPredicted RBP15.73■□□□□ 0.11
HOXC9-202ENST00000504557 CITO14578 2027 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 NPHP3-ACAD11A0A0J9YXS1 232 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 NCK2O43639 380 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 EDN1P05305 212 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 GALTP07902 379 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 OR1G1P47890 313 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 RESTQ13127 1097 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 DMP1Q13316 513 aaPredicted RBP15.72■□□□□ 0.11
HOXC9-202ENST00000504557 ADAM15Q13444 863 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 VPS52Q8N1B4 723 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 TMEM87AQ8NBN3 555 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 CALML4Q96GE6 196 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 INTS4Q96HW7 963 aaKnown RBP15.72■□□□□ 0.11
HOXC9-202ENST00000504557 APOL5Q9BWW9 433 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 NT5C3AQ9H0P0 336 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 FZD8Q9H461 694 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 PDZD7Q9H5P4 517 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 MIOSQ9NXC5 875 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 LZTS1Q9Y250 596 aa15.72■□□□□ 0.11
HOXC9-202ENST00000504557 A0A1B0GUA9 196 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 K7ERI5 159 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 FSCN2O14926 492 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 N4BP3O15049 544 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 STX6O43752 255 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 BMP15O95972 392 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 PLA2G4BP0C869 781 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 SSTR3P32745 418 aaPredicted RBP15.71■□□□□ 0.11
HOXC9-202ENST00000504557 KARSQ15046 597 aaKnown RBP15.71■□□□□ 0.11
HOXC9-202ENST00000504557 EEF1DP3Q658K8 133 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 C1orf186Q6ZWK4 172 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 DAW1Q8N136 415 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 EFHBQ8N7U6 833 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 RABGGTAQ92696 567 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 IGSF21Q96ID5 467 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 PRIMPOLQ96LW4 560 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 DRC1Q96MC2 740 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 RPS6KC1Q96S38 1066 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 ADPGKQ9BRR6 497 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 CCDC113Q9H0I3 377 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 UBN1Q9NPG3 1134 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 KMT5AQ9NQR1 393 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 KANSL3Q9P2N6 904 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 MTMR6Q9Y217 621 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 FAN1Q9Y2M0 1017 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 GDAQ9Y2T3 454 aa15.71■□□□□ 0.11
HOXC9-202ENST00000504557 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.7■□□□□ 0.1
HOXC9-202ENST00000504557 GRXCR2A6NFK2 248 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 NRP1O14786 923 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 SLC16A4O15374 487 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 CXCL14O95715 111 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 GLP2RO95838 553 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 NPTX2P47972 431 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 SMC1AQ14683 1233 aaKnown RBP15.7■□□□□ 0.1
HOXC9-202ENST00000504557 DUSP6Q16828 381 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 CTC1Q2NKJ3 1217 aa15.7■□□□□ 0.1
HOXC9-202ENST00000504557 FOXD4L6Q3SYB3 417 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms