RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 NDUFS2O75306 463 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 GSPT1P15170 499 aaKnown RBP6.82□□□□□ -1.32
COPS4-203ENST00000504274 WNT3AP56704 352 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 DUSP2Q05923 314 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 FAM111BQ6SJ93 734 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 PNMA8AQ86V59 439 aaPredicted RBP6.82□□□□□ -1.32
COPS4-203ENST00000504274 HOXB13Q92826 284 aaPredicted RBP6.82□□□□□ -1.32
COPS4-203ENST00000504274 C8orf49Q96NF6 230 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 MSL2Q9HCI7 577 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 HECAQ9UBI9 543 aaPredicted RBP6.82□□□□□ -1.32
COPS4-203ENST00000504274 JAG2Q9Y219 1238 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 SH3BP1Q9Y3L3 701 aa6.82□□□□□ -1.32
COPS4-203ENST00000504274 WNT10BO00744 389 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 ITGA10O75578 1167 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 ALDH1L1O75891 902 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 NEK2P51955 445 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 NPEPPSP55786 919 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 KRT85P78386 507 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 SEPT2Q15019 361 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 NOMO1Q15155 1222 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 MST1LQ2TV78 715 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 ERICH6BQ5W0A0 696 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 ZNF585AQ6P3V2 769 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 POLNQ7Z5Q5 900 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 OR5M3Q8NGP4 307 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 NRG4Q8WWG1 115 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 DPF2Q92785 391 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 PAWRQ96IZ0 340 aaKnown RBP6.81□□□□□ -1.32
COPS4-203ENST00000504274 ADI1Q9BV57 179 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 RBM12Q9NTZ6 932 aaKnown RBP6.81□□□□□ -1.32
COPS4-203ENST00000504274 SMPD4Q9NXE4 827 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 GPRC5DQ9NZD1 345 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 TRPS1Q9UHF7 1281 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 CNOT11Q9UKZ1 510 aaKnown RBP6.81□□□□□ -1.32
COPS4-203ENST00000504274 DNM3Q9UQ16 869 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 SPEF1Q9Y4P9 236 aa6.81□□□□□ -1.32
COPS4-203ENST00000504274 ZRANB2O95218 330 aaKnown RBP eCLIP6.8□□□□□ -1.32
COPS4-203ENST00000504274 COMTP21964 271 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 CCND1P24385 295 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 EFEMP1Q12805 493 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 TTF1Q15361 905 aaPredicted RBP6.8□□□□□ -1.32
COPS4-203ENST00000504274 PLEKHG6Q3KR16 790 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 SPTY2D1Q68D10 685 aaPredicted RBP6.8□□□□□ -1.32
COPS4-203ENST00000504274 RAVER1Q8IY67 606 aaKnown RBP6.8□□□□□ -1.32
COPS4-203ENST00000504274 ANKRD13AQ8IZ07 590 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 D2HGDHQ8N465 521 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 ZNF808Q8N4W9 903 aaPredicted RBP6.8□□□□□ -1.32
COPS4-203ENST00000504274 REPS2Q8NFH8 660 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 FBXO18Q8NFZ0 1043 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 MDM1Q8TC05 714 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 ZNF480Q8WV37 535 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 SSH1Q8WYL5 1049 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 ARL8AQ96BM9 186 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 CHMP4CQ96CF2 233 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 MRFAP1Q9Y605 127 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 ZMYM3Q14202 1370 aa6.8□□□□□ -1.32
COPS4-203ENST00000504274 NRP1O14786 923 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 GYPEP15421 78 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 ACO1P21399 889 aaKnown RBP6.79□□□□□ -1.32
COPS4-203ENST00000504274 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
COPS4-203ENST00000504274 FKBP15Q5T1M5 1219 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 EFCAB2Q5VUJ9 269 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 MAMDC4Q6UXC1 1216 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 ZBTB46Q86UZ6 589 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 TTC9BQ8N6N2 239 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 CHST13Q8NET6 341 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 HOOK2Q96ED9 719 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 ZNF512Q96ME7 567 aaPredicted RBP6.79□□□□□ -1.32
COPS4-203ENST00000504274 AASDHPPTQ9NRN7 309 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 SERPINB13Q9UIV8 391 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 ZBTB21Q9ULJ3 1066 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 SIK3Q9Y2K2 1263 aa6.79□□□□□ -1.32
COPS4-203ENST00000504274 THRAP3Q9Y2W1 955 aaKnown RBP6.79□□□□□ -1.32
COPS4-203ENST00000504274 HOXA3O43365 443 aaPredicted RBP6.78□□□□□ -1.32
COPS4-203ENST00000504274 PHF2O75151 1096 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 SLC6A9P48067 706 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 MCL1Q07820 350 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 MGAT2Q10469 447 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 MRPL49Q13405 166 aaKnown RBP6.78□□□□□ -1.32
COPS4-203ENST00000504274 PRAMEF14Q5SWL7 426 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 ELOA2Q8IYF1 753 aaPredicted RBP6.78□□□□□ -1.32
COPS4-203ENST00000504274 THEMISQ8N1K5 641 aaPredicted RBP6.78□□□□□ -1.32
COPS4-203ENST00000504274 IL17RAQ96F46 866 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 CEP95Q96GE4 821 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 KLC2Q9H0B6 622 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 DEF6Q9H4E7 631 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 LDAHQ9H6V9 325 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 INTUQ9ULD6 942 aa6.78□□□□□ -1.32
COPS4-203ENST00000504274 SNUPNO95149 360 aaKnown RBP6.77□□□□□ -1.33
COPS4-203ENST00000504274 EDNRBP24530 442 aa6.77□□□□□ -1.33
COPS4-203ENST00000504274 ECHS1P30084 290 aa6.77□□□□□ -1.33
COPS4-203ENST00000504274 CRHR1P34998 444 aa6.77□□□□□ -1.33
COPS4-203ENST00000504274 SREBF1P36956 1147 aa6.77□□□□□ -1.33
COPS4-203ENST00000504274 RECQLP46063 649 aaPredicted RBP6.77□□□□□ -1.33
COPS4-203ENST00000504274 GZMKP49863 264 aa6.77□□□□□ -1.33
COPS4-203ENST00000504274 ADAM17P78536 824 aa6.77□□□□□ -1.33
COPS4-203ENST00000504274 KIF23Q02241 960 aaPredicted RBP6.77□□□□□ -1.33
COPS4-203ENST00000504274 R3HDM1Q15032 1099 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms