RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 FSBPO95073 299 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 PRR23D2P0DMB1 279 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 SLC6A3Q01959 620 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZNF169Q14929 603 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 SRSF7Q16629 238 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 FOXB2Q5VYV0 432 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 SLFN12LQ6IEE8 588 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 PTF1AQ7RTS3 328 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 EXOC2Q96KP1 924 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 UIMC1Q96RL1 719 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 HIRIP3Q9BW71 556 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 CELF4Q9BZC1 486 aaKnown RBP3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 ACSS2Q9NR19 701 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 RNF181Q9P0P0 153 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 NDOR1Q9UHB4 597 aa3.18□□□□□ -1.9
HMGB3P17-201ENST00000504195 PRR5-ARHGAP8B1AHC4 643 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 DIAPH1O60610 1272 aaKnown RBP3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 NPTXRO95502 500 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 FAM153BP0C7A2 387 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 HSP90B1P14625 803 aaKnown RBP3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZSCAN20P17040 1043 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 MGAT1P26572 445 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 RGS3P49796 1198 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 TM4SF20Q53R12 229 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 DRICH1Q6PGQ1 229 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 SMRP1Q8NCR6 262 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZNF428Q96B54 188 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 RGMAQ96B86 450 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 MAGEB10Q96LZ2 347 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 SIRPGQ9P1W8 387 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 SLC17A6Q9P2U8 582 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 DNAI1Q9UI46 699 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 ZNF112Q9UJU3 913 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 COQ6Q9Y2Z9 468 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 CCDC9Q9Y3X0 531 aaKnown RBP3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 KDM2BQ8NHM5 1336 aa3.17□□□□□ -1.9
HMGB3P17-201ENST00000504195 UBA6A0AVT1 1052 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 RASGRP1O95267 797 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 FOSP01100 380 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 FDXRP22570 491 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 SIM1P81133 766 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 OCA2Q04671 838 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 MRPL49Q13405 166 aaKnown RBP3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 TP53BP2Q13625 1128 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 TTC38Q5R3I4 469 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 ATG9BQ674R7 924 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 NME9Q86XW9 330 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 SLC44A3Q8N4M1 653 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 C2orf69Q8N8R5 385 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 OR5M3Q8NGP4 307 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 ASB10Q8WXI3 467 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 IL17RAQ96F46 866 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 CPEB1Q9BZB8 566 aaKnown RBP3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 SLC52A2Q9HAB3 445 aa3.16□□□□□ -1.9
HMGB3P17-201ENST00000504195 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 UNC119BA6NIH7 251 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 LRRC3CA6NJW4 275 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 C1QL1O75973 258 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 RBP3P10745 1247 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 ITGAMP11215 1152 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 HNRNPLP14866 589 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 ATP2B1P20020 1258 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 RNASE9P60153 205 aaKnown RBP3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 IRF9Q00978 393 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 FAM214AQ32MH5 1076 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 FSTL4Q6MZW2 842 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 OVCH1Q7RTY7 1134 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 GPRIN1Q7Z2K8 1008 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 GSTCDQ8NEC7 633 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 BOCQ9BWV1 1114 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 ALOXE3Q9BYJ1 711 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 FPGT-TNNI3KV9GXZ4 949 aa3.15□□□□□ -1.91
HMGB3P17-201ENST00000504195 LEFTY2O00292 366 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 CDKL5O76039 1030 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 SPDEFO95238 335 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 GZMKP49863 264 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 PTTG1IPP53801 180 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 NHLH2Q02577 135 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 TRIM61Q5EBN2 209 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 ZNF788Q6ZQV5 615 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 UNC5BQ8IZJ1 945 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 IGSF22Q8N9C0 903 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 DEPDC7Q96QD5 511 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 ADAM2Q99965 735 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 HEPHQ9BQS7 1158 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 LSM14BQ9BX40 385 aaKnown RBP3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 TANGO6Q9C0B7 1094 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 USP36Q9P275 1121 aaKnown RBP3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 LRIT1Q9P2V4 623 aa3.14□□□□□ -1.91
HMGB3P17-201ENST00000504195 CCDC163A0A0D9SF12 145 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 TCRBV16S1A1N1A0A5B0 115 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 MARCH11A6NNE9 402 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 ALDH1A2O94788 518 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 CYP17A1P05093 508 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 RESTQ13127 1097 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 ARHGAP44Q17R89 818 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 SPDYE7PQ495Y7 208 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 TMEM177Q53S58 311 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 PRAMEF9Q5VWM5 478 aa3.13□□□□□ -1.91
HMGB3P17-201ENST00000504195 Q6ZNX1 250 aa3.13□□□□□ -1.91
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