RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 EVA1CP58658 441 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 COL10A1Q03692 680 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 DHCR24Q15392 516 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 DDB1Q16531 1140 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 FAM214AQ32MH5 1076 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 DCAF17Q5H9S7 520 aaPredicted RBP5.68□□□□□ -1.5
SUB1-204ENST00000504016 NAIF1Q69YI7 327 aaPredicted RBP5.68□□□□□ -1.5
SUB1-204ENST00000504016 KCNV1Q6PIU1 500 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 RHOUQ7L0Q8 258 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 KRT26Q7Z3Y9 468 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 CPPED1Q9BRF8 314 aaPredicted RBP5.68□□□□□ -1.5
SUB1-204ENST00000504016 SOX7Q9BT81 388 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 MLST8Q9BVC4 326 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 ANO3Q9BYT9 981 aa5.68□□□□□ -1.5
SUB1-204ENST00000504016 GRXCR1A8MXD5 290 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 NRP1O14786 923 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 PPFIA4O75335 1185 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 SCAF4O95104 1147 aaKnown RBP5.67□□□□□ -1.5
SUB1-204ENST00000504016 PCDH8O95206 1070 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 CLEC2LP0C7M8 214 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 NR4A1P22736 598 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 OCRLQ01968 901 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 STAT4Q14765 748 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 AFAP1L2Q8N4X5 818 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 OR5M3Q8NGP4 307 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 GPR150Q8NGU9 434 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 SLC5A5Q92911 643 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 ZNF496Q96IT1 587 aaPredicted RBP5.67□□□□□ -1.5
SUB1-204ENST00000504016 VTA1Q9NP79 307 aa5.67□□□□□ -1.5
SUB1-204ENST00000504016 NOC2LQ9Y3T9 749 aaKnown RBP5.67□□□□□ -1.5
SUB1-204ENST00000504016 ANKRD62A6NC57 917 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 ELL2O00472 640 aaPredicted RBP5.66□□□□□ -1.5
SUB1-204ENST00000504016 ALDH1A2O94788 518 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 POU3F3P20264 500 aaPredicted RBP5.66□□□□□ -1.5
SUB1-204ENST00000504016 CD40P25942 277 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 LSP1P33241 339 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 TERF2Q15554 542 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 TIGD2Q4W5G0 525 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 DDX42Q86XP3 938 aaKnown RBP eCLIP5.66□□□□□ -1.5
SUB1-204ENST00000504016 CMIPQ8IY22 773 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 COG1Q8WTW3 980 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 EIF2B4Q9UI10 523 aaKnown RBP5.66□□□□□ -1.5
SUB1-204ENST00000504016 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 MYPNQ86TC9 1320 aa5.66□□□□□ -1.5
SUB1-204ENST00000504016 NUDT3O95989 172 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 VIL1P09327 827 aaKnown RBP5.65□□□□□ -1.5
SUB1-204ENST00000504016 GYPEP15421 78 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 PROZP22891 400 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 CASRP41180 1078 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 CD69Q07108 199 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 FAM50AQ14320 339 aaKnown RBP5.65□□□□□ -1.5
SUB1-204ENST00000504016 IQSEC1Q6DN90 963 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 LRRC55Q6ZSA7 311 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 FAM83AQ86UY5 434 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 UNC5BQ8IZJ1 945 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 PIK3C3Q8NEB9 887 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 WDR66Q8TBY9 1149 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 USP18Q9UMW8 372 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 EDARQ9UNE0 448 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 HDAC5Q9UQL6 1122 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 PCDHB6Q9Y5E3 794 aa5.65□□□□□ -1.5
SUB1-204ENST00000504016 ST20-MTHFSA0A0A6YYL1 179 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 TRIM24O15164 1050 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 ZEB2O60315 1214 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 KDM1AO60341 852 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 EYA4O95677 639 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 LAG3P18627 525 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 ADRA1BP35368 520 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 SCAND1P57086 179 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 AMPD3Q01432 767 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 CT83Q5H943 113 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 ESPNLQ6ZVH7 1005 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 CXorf67Q86X51 503 aaPredicted RBP5.64□□□□□ -1.51
SUB1-204ENST00000504016 CDYL2Q8N8U2 506 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 ZNF610Q8N9Z0 462 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 GLB1L3Q8NCI6 653 aaPredicted RBP5.64□□□□□ -1.51
SUB1-204ENST00000504016 CLRN3Q8NCR9 226 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 PPP1R14CQ8TAE6 165 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 FERMT2Q96AC1 680 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 ENKD1Q9H0I2 346 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 TOPORSQ9NS56 1045 aaPredicted RBP5.64□□□□□ -1.51
SUB1-204ENST00000504016 ZNHIT2Q9UHR6 403 aa5.64□□□□□ -1.51
SUB1-204ENST00000504016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.63□□□□□ -1.51
SUB1-204ENST00000504016 PRSS38A1L453 326 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 CFBP00751 764 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 LMNAP02545 664 aaKnown RBP5.63□□□□□ -1.51
SUB1-204ENST00000504016 CPEP16870 476 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 LRRC32Q14392 662 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 PDCD1Q15116 288 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 METTL24Q5JXM2 366 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 ZBTB41Q5SVQ8 909 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 CCDC62Q6P9F0 684 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 FRMD7Q6ZUT3 714 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 TGFBRAP1Q8WUH2 860 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 IL17RAQ96F46 866 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 KCNH6Q9H252 994 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 ZNF768Q9H5H4 540 aaKnown RBP5.63□□□□□ -1.51
SUB1-204ENST00000504016 RIOX1Q9H6W3 641 aa5.63□□□□□ -1.51
SUB1-204ENST00000504016 CYP4F11Q9HBI6 524 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms