RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 GTF2H1P32780 548 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 ZNF792Q3KQV3 632 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 ANKRD23Q86SG2 305 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 ARHGEF19Q8IW93 802 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 DEPTORQ8TB45 409 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 EPC1Q9H2F5 836 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 GBA2Q9HCG7 927 aaPredicted RBP23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 TMEM8AQ9HCN3 771 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 SNX12Q9UMY4 172 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 PLXNB2O15031 1838 aa23.15■■□□□ 1.3
UBE2D3-216ENST00000503742 BUB1O43683 1085 aa23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 CCDC172P0C7W6 258 aa23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 LIG4P49917 911 aa23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 STRN3Q13033 797 aa23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 KRT39Q6A163 491 aa23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 DHX37Q8IY37 1157 aaKnown RBP23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 CCDC127Q96BQ5 260 aa23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 CCDC94Q9BW85 323 aaPredicted RBP23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 UBE2TQ9NPD8 197 aaPredicted RBP23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 MORF4L1Q9UBU8 362 aa23.14■■□□□ 1.3
UBE2D3-216ENST00000503742 LRRIQ4A6NIV6 560 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 FOXN3O00409 490 aaPredicted RBP23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 NOP56O00567 594 aaKnown RBP23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 KIF22Q14807 665 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 ARHGAP44Q17R89 818 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 ARMCX2Q7L311 632 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 LNX1Q8TBB1 728 aaPredicted RBP23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 ATP8B4Q8TF62 1192 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 GLG1Q92896 1179 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 SPATA33Q96N06 139 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 TMEM134Q9H6X4 195 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 KIAA1586Q9HCI6 787 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 PDGFCQ9NRA1 345 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 DIS3Q9Y2L1 958 aaKnown RBP23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 PCDHGC5Q9Y5F6 944 aa23.14■■□□□ 1.29
UBE2D3-216ENST00000503742 ZBTB42B2RXF5 422 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 KIAA0391O15091 583 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 EXTL3O43909 919 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 TXNP10599 105 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 GCLCP48506 637 aaPredicted RBP23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 MAP2K1Q02750 393 aaPredicted RBP23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 TTLL4Q14679 1199 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 TMEM63BQ5T3F8 832 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 USP37Q86T82 979 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 TRIM50Q86XT4 487 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 SEMA4DQ92854 862 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 COPS5Q92905 334 aa23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 POP1Q99575 1024 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-216ENST00000503742 K7ERI5 159 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 GPC3P51654 580 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 CLCN6P51797 869 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 CAPSQ13938 189 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 ABRAQ8N0Z2 381 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 SCFD2Q8WU76 684 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 FAM213AQ9BRX8 229 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 INTUQ9ULD6 942 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 IGKV6-21A0A0C4DH24 114 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 ADORA2AP29274 412 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 MKRN3Q13064 507 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 DRP2Q13474 957 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 PLCB4Q15147 1175 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 PSPC1Q8WXF1 523 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 MMS19Q96T76 1030 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 TLR10Q9BXR5 811 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 HAPLN2Q9GZV7 340 aa23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 TOPORSQ9NS56 1045 aaPredicted RBP23.12■■□□□ 1.29
UBE2D3-216ENST00000503742 ZNF233A6NK53 670 aa23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 GAS2O43903 313 aaKnown RBP23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 ADCY3O60266 1144 aa23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 MARK3P27448 753 aa23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 SLC26A2P50443 739 aa23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 CLDN10P78369 228 aa23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 IER5Q5VY09 327 aa23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 PARD6BQ9BYG5 372 aa23.11■■□□□ 1.29
UBE2D3-216ENST00000503742 ZNF185O15231 689 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 NAP1L1P55209 391 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 CKAP4Q07065 602 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 MKRN4PQ13434 485 aaPredicted RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 SPRYD7Q5W111 196 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 SLFN12LQ6IEE8 588 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 TAPT1Q6NXT6 567 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 MSANTD4Q8NCY6 345 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 PRPF31Q8WWY3 499 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 ANKZF1Q9H8Y5 726 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 STRNO43815 780 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 PALMO75781 387 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 EDN1P05305 212 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 C15orf39Q6ZRI6 1047 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 SV2AQ7L0J3 742 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 CREG2Q8IUH2 290 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 EXOC8Q8IYI6 725 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 NOA1Q8NC60 698 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 FBXL13Q8NEE6 735 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 U2AF1L4Q8WU68 220 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 RPGRIP1Q96KN7 1286 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 OSBPL9Q96SU4 736 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 SMARCAD1Q9H4L7 1026 aa23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 ARGLU1Q9NWB6 273 aaPredicted RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 AGO2Q9UKV8 859 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-216ENST00000503742 HYOU1Q9Y4L1 999 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms