RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 LARP1BQ659C4 914 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 EFHBQ8N7U6 833 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 IGSF22Q8N9C0 903 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 PGBD4Q96DM1 585 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 GAD1Q99259 594 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 MMTAG2Q9BU76 263 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 NXF3Q9H4D5 531 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 KLK14Q9P0G3 267 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 RAPGEFL1Q9UHV5 662 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 PUF60Q9UHX1 559 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 CDH22Q9UJ99 828 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 TRIOO75962 3097 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 F8W810 466 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 ITGA4P13612 1032 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 CYP11B2P19099 503 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 NCLP19338 710 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 MLH1P40692 756 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 KRT17Q04695 432 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 HAUS3Q68CZ6 603 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 NOTUMQ6P988 496 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 GJD3Q8N144 294 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 RABGGTAQ92696 567 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 PPP2R3CQ969Q6 453 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 TMEM169Q96HH4 297 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 MSLNLQ96KJ4 702 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 VN1R3Q9BXE9 311 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 BACH2Q9BYV9 841 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 CSRNP2Q9H175 543 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 CD207Q9UJ71 328 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 KIF3AQ9Y496 699 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 NCK2O43639 380 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
COPS4-202ENST00000503682 PPM1AP35813 382 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 MCM2P49736 904 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 SCNN1GP51170 649 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 PDIA5Q14554 519 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 KANK3Q6NY19 840 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 VPS52Q8N1B4 723 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 FEZF2Q8TBJ5 459 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 IGSF21Q96ID5 467 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 LZTS1Q9Y250 596 aa11.28□□□□□ -0.6
COPS4-202ENST00000503682 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
COPS4-202ENST00000503682 PLXNA3P51805 1871 aa11.27□□□□□ -0.6
COPS4-202ENST00000503682 FAM86C2PA6NEL3 165 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 ARL5CA6NH57 179 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 SFI1A8K8P3 1242 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 NRP1O14786 923 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 CXCL14O95715 111 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
COPS4-202ENST00000503682 GRIN1Q05586 938 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 ZP2Q05996 745 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 POU5F1BQ06416 359 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 RAD51AP2Q09MP3 1159 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 EEF1DP3Q658K8 133 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 URGCPQ8TCY9 931 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 PNMA5Q96PV4 448 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
COPS4-202ENST00000503682 RUSC1Q9BVN2 902 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
COPS4-202ENST00000503682 FZD8Q9H461 694 aa11.27□□□□□ -0.61
COPS4-202ENST00000503682 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.27□□□□□ -0.61
COPS4-202ENST00000503682 A0A1B0GUA9 196 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 VPS37CA5D8V6 355 aaPredicted RBP11.26□□□□□ -0.61
COPS4-202ENST00000503682 C2orf71A6NGG8 1288 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 AXLP30530 894 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 OR1G1P47890 313 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 NCBP1Q09161 790 aaKnown RBP11.26□□□□□ -0.61
COPS4-202ENST00000503682 SMAD4Q13485 552 aaKnown RBP11.26□□□□□ -0.61
COPS4-202ENST00000503682 KCNC3Q14003 757 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 SMAD2Q15796 467 aaKnown RBP11.26□□□□□ -0.61
COPS4-202ENST00000503682 TMEM132AQ24JP5 1023 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 CDCA2Q69YH5 1023 aaPredicted RBP11.26□□□□□ -0.61
COPS4-202ENST00000503682 FAM173BQ6P4H8 233 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 TAS1R1Q7RTX1 841 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 ZBTB8OSQ8IWT0 167 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 DAW1Q8N136 415 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 MRPL43Q8N983 215 aaKnown RBP11.26□□□□□ -0.61
COPS4-202ENST00000503682 GSTCDQ8NEC7 633 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 NFKBIZQ9BYH8 718 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 ZBP1Q9H171 429 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 MARCH5Q9NX47 278 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 PARP2Q9UGN5 583 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 FAN1Q9Y2M0 1017 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 HCFC2Q9Y5Z7 792 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 CNTNAP2Q9UHC6 1331 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.26□□□□□ -0.61
COPS4-202ENST00000503682 C2CD2LO14523 706 aa11.26□□□□□ -0.61
COPS4-202ENST00000503682 CLASP2O75122 1294 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms