RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PAN2Q504Q3 1202 aaKnown RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 ATF7IP2Q5U623 682 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 CNNM4Q6P4Q7 775 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 CLEC17AQ6ZS10 378 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 ZNF598Q86UK7 904 aaKnown RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 GLIS3Q8NEA6 775 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 TRAIPQ9BWF2 469 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 MRPL4Q9BYD3 311 aaKnown RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 TMEM161AQ9NX61 479 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 MSRAQ9UJ68 235 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 HES2Q9Y543 173 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 EYSQ5T1H1 3165 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 DGKIO75912 1065 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 MYBP10242 640 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 RAB30Q15771 203 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 SLC27A1Q6PCB7 646 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 FAM43BQ6ZT52 329 aaPredicted RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 ZNF720Q7Z2F6 126 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 SPRED2Q7Z698 418 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 SMG8Q8ND04 991 aaKnown RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 TIFAQ96CG3 184 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 CCDC51Q96ER9 411 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 ACO2Q99798 780 aaKnown RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 APOL6Q9BWW8 343 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 TRIM6Q9C030 488 aaPredicted RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 IKZF4Q9H2S9 585 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 NXF3Q9H4D5 531 aaKnown RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 RNF19AQ9NV58 838 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 SEL1LQ9UBV2 794 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 TBX20Q9UMR3 447 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 INSL6Q9Y581 213 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 TRANK1O15050 2925 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 H0YCG3 227 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 N4BP3O15049 544 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 GTPBP6O43824 516 aaPredicted RBP18.11■□□□□ 0.49
SCLT1-205ENST00000503401 GCNT3O95395 438 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 UBE2HP62256 183 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 GTF2BQ00403 316 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 KCNA1Q09470 495 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 CLLU1OSQ5K130 101 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 UNC13DQ70J99 1090 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 BICD1Q96G01 975 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 ZBTB45Q96K62 511 aaPredicted RBP18.11■□□□□ 0.49
SCLT1-205ENST00000503401 RNF39Q9H2S5 420 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 ELAC1Q9H777 363 aaKnown RBP18.11■□□□□ 0.49
SCLT1-205ENST00000503401 RC3H2Q9HBD1 1191 aaKnown RBP18.11■□□□□ 0.49
SCLT1-205ENST00000503401 OLFML3Q9NRN5 406 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 IPPQ9Y573 584 aa18.11■□□□□ 0.49
SCLT1-205ENST00000503401 KLRC4O43908 158 aa18.1■□□□□ 0.49
SCLT1-205ENST00000503401 ZNF623O75123 536 aa18.1■□□□□ 0.49
SCLT1-205ENST00000503401 RAB27AP51159 221 aa18.1■□□□□ 0.49
SCLT1-205ENST00000503401 ZBTB33Q86T24 672 aa18.1■□□□□ 0.49
SCLT1-205ENST00000503401 ZNF689Q96CS4 500 aaPredicted RBP18.1■□□□□ 0.49
SCLT1-205ENST00000503401 GBP4Q96PP9 640 aa18.1■□□□□ 0.49
SCLT1-205ENST00000503401 ANKFY1Q9P2R3 1169 aa18.1■□□□□ 0.49
SCLT1-205ENST00000503401 TBKBP1A7MCY6 615 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 PPP1R37O75864 691 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 EOMESO95936 686 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 HARSP12081 509 aaKnown RBP18.09■□□□□ 0.49
SCLT1-205ENST00000503401 SKIP12755 728 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 PNOCQ13519 176 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 PPP2R2DQ66LE6 453 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 AGMOQ6ZNB7 445 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 HELQQ8TDG4 1101 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 ERCC4Q92889 916 aaPredicted RBP18.09■□□□□ 0.49
SCLT1-205ENST00000503401 STRA6Q9BX79 667 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 ST6GALNAC4Q9H4F1 302 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 CERS4Q9HA82 394 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 PTPRHQ9HD43 1115 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 HCSTQ9UBK5 93 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 TNFSF13BQ9Y275 285 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 TRIP11Q15643 1979 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 NLRC5Q86WI3 1866 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 KIAA1671Q9BY89 1806 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 PVALEFA0A1B0GWK0 134 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 TISP43B9A030 160 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 HNRNPDLO14979 420 aaKnown RBP18.09■□□□□ 0.49
SCLT1-205ENST00000503401 PRPF6O94906 941 aaKnown RBP18.09■□□□□ 0.49
SCLT1-205ENST00000503401 AKAP5P24588 427 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 AFF1P51825 1210 aaKnown RBP18.09■□□□□ 0.49
SCLT1-205ENST00000503401 EHHADHQ08426 723 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 DPYDQ12882 1025 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 BTG3Q14201 252 aaPredicted RBP18.09■□□□□ 0.49
SCLT1-205ENST00000503401 POSTNQ15063 836 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 ZNF568Q3ZCX4 644 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 KMT5BQ4FZB7 885 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 FAM26FQ5R3K3 315 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 MRPL10Q7Z7H8 261 aaKnown RBP18.09■□□□□ 0.49
SCLT1-205ENST00000503401 SLC17A8Q8NDX2 589 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 KCNN1Q92952 543 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 FAM161BQ96MY7 647 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 ADPGKQ9BRR6 497 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 TCHPQ9BT92 498 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 SLC39A2Q9NP94 309 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 INPP5FQ9Y2H2 1132 aa18.09■□□□□ 0.49
SCLT1-205ENST00000503401 LINC01553A4QN01 128 aa18.08■□□□□ 0.48
SCLT1-205ENST00000503401 ABLIM1O14639 778 aa18.08■□□□□ 0.48
SCLT1-205ENST00000503401 RPN1P04843 607 aaKnown RBP18.08■□□□□ 0.48
SCLT1-205ENST00000503401 ITGA4P13612 1032 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms