RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 KIAA0319LQ8IZA0 1049 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 ARRDC4Q8NCT1 418 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 NEK11Q8NG66 645 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 NLRP7Q8WX94 980 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 SLC35C1Q96A29 364 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 VTI1AQ96AJ9 217 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 LENG1Q96BZ8 264 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 PCMTD1Q96MG8 357 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 SCLT1Q96NL6 688 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 CBWD1Q9BRT8 395 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 GCOM2Q9BZD3 368 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 PLCB1Q9NQ66 1216 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 SETD4Q9NVD3 440 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 AGO2Q9UKV8 859 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 CAPN11Q9UMQ6 739 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 LUC7L2Q9Y383 392 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 TRIM17Q9Y577 477 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 KAT6AQ92794 2004 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 A0A0B4J269 797 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ANKRD63C9JTQ0 380 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 M0QZ92 97 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 CCP110O43303 1012 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MFAP3LO75121 409 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ERLIN2O94905 339 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 PGK1P00558 417 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 GYPCP04921 128 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 INHAP05111 366 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 RFX1P22670 979 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ADSSP30520 456 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 AXLP30530 894 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MATR3P43243 847 aaKnown RBP eCLIP8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 GPC3P51654 580 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 AP3M2P53677 418 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ZBED6P86452 979 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MBTD1Q05BQ5 628 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 C1QBPQ07021 282 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MCL1Q07820 350 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 RBL2Q08999 1139 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 TRIM32Q13049 653 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 KCNA10Q16322 511 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 EXOC3L4Q17RC7 722 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 TMEM132AQ24JP5 1023 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ATF7IP2Q5U623 682 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MPZL3Q6UWV2 235 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 RPAINQ86UA6 219 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 OR8K1Q8NGG5 319 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 FAM81BQ96LP2 452 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MFSD14AQ96MC6 490 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 FNBP1Q96RU3 617 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ACO2Q99798 780 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ADPGKQ9BRR6 497 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 TARS2Q9BW92 718 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 PCIF1Q9H4Z3 704 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MMRN2Q9H8L6 949 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 IFT122Q9HBG6 1241 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 ZNHIT6Q9NWK9 470 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 HDAC6Q9UBN7 1215 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 GTF2IRD1Q9UHL9 959 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 FBXL5Q9UKA1 691 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 MYO6Q9UM54 1294 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 TNFSF13BQ9Y275 285 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 SIK3Q9Y2K2 1263 aa8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.85□□□□□ -0.99
TOPBP1-202ENST00000503338 CNTNAP2Q9UHC6 1331 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 A0A087WZ62 844 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 ESPNB1AK53 854 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 OGTO15294 1046 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 ARHGAP6O43182 974 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 VTNP04004 478 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 ASGR1P07306 291 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 SKILP12757 684 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 PROZP22891 400 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CASP14P31944 242 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 KRT9P35527 623 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 FMO5P49326 533 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CHMP4BP1P59074 171 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 C1QTNF8P60827 252 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CAP1Q01518 475 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CYP24A1Q07973 514 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 ARID5BQ14865 1188 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 NOLC1Q14978 699 aaKnown RBP eCLIP8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 PSMD6Q15008 389 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 NBPF20Q3BBV1 942 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 SMYD5Q6GMV2 418 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CCSAPQ6IQ19 270 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 SLC39A4Q6P5W5 647 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CXCL17Q6UXB2 119 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 FAM43BQ6ZT52 329 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 TMTC1Q8IUR5 882 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 TC2NQ8N9U0 490 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 RDH13Q8NBN7 331 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 PARD3BQ8TEW8 1205 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 CACTINQ8WUQ7 758 aaKnown RBP8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 GLT1D1Q96MS3 346 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 BAG1Q99933 345 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 FDXACB1Q9BRP7 624 aaPredicted RBP8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 TCHPQ9BT92 498 aa8.84□□□□□ -0.99
TOPBP1-202ENST00000503338 MSTO1Q9BUK6 570 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms