RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 NFRKBQ6P4R8 1299 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 SLC39A4Q6P5W5 647 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 GBP6Q6ZN66 633 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 TSHZ1Q6ZSZ6 1077 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 TRMT1LQ7Z2T5 733 aaKnown RBP9.89□□□□□ -0.83
NR1I3-216ENST00000502848 GPD1LQ8N335 351 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 RNF149Q8NC42 400 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 KLHDC9Q8NEP7 349 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 NEK11Q8NG66 645 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 CD99L2Q8TCZ2 262 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 RAET1EQ8TD07 263 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 CACTINQ8WUQ7 758 aaKnown RBP9.89□□□□□ -0.83
NR1I3-216ENST00000502848 POMGNT1Q8WZA1 660 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 FAM212AQ96EL1 285 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 BICD1Q96G01 975 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 FAM81BQ96LP2 452 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 MFSD14AQ96MC6 490 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 CBWD1Q9BRT8 395 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 SUGCTQ9HAC7 445 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 XPNPEP3Q9NQH7 507 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 CEP72Q9P209 647 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 TNFSF13BQ9Y275 285 aa9.89□□□□□ -0.83
NR1I3-216ENST00000502848 C17orf102A2RUQ5 167 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 ZNF233A6NK53 670 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 HAX1O00165 279 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 CLDN3O15551 220 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 CAND2O75155 1236 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 C6orf222P0C671 652 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-216ENST00000502848 SKILP12757 684 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 CAPN2P17655 700 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 ANXA13P27216 316 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 AXLP30530 894 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 FMO5P49326 533 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 CLCN3P51790 818 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 VAMP7P51809 220 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 NUBP1P53384 320 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 SOX10P56693 466 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 MBTD1Q05BQ5 628 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 RBL2Q08999 1139 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 PSMD6Q15008 389 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 MEA1Q16626 185 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 EXOC3L4Q17RC7 722 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 GNASQ5JWF2 1037 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 CCSAPQ6IQ19 270 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-216ENST00000502848 RNF180Q86T96 592 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 RHPN2Q8IUC4 686 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 TMTC1Q8IUR5 882 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 KIAA0319LQ8IZA0 1049 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 LRRC71Q8N4P6 559 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 METTL13Q8N6R0 699 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 OR8K1Q8NGG5 319 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 KIAA1524Q8TCG1 905 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 ZNF296Q8WUU4 475 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-216ENST00000502848 EEF2KMTQ96G04 330 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 ACO2Q99798 780 aaKnown RBP9.88□□□□□ -0.83
NR1I3-216ENST00000502848 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 KIFC3Q9BVG8 833 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 KCNF1Q9H3M0 494 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 IFT122Q9HBG6 1241 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 POLD4Q9HCU8 107 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 ABHD10Q9NUJ1 306 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 ZNHIT6Q9NWK9 470 aaKnown RBP9.88□□□□□ -0.83
NR1I3-216ENST00000502848 DDX20Q9UHI6 824 aaKnown RBP9.88□□□□□ -0.83
NR1I3-216ENST00000502848 AGO2Q9UKV8 859 aaKnown RBP9.88□□□□□ -0.83
NR1I3-216ENST00000502848 COQ4Q9Y3A0 265 aa9.88□□□□□ -0.83
NR1I3-216ENST00000502848 TTC26A0AVF1 554 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 GOLGA6L9A6NEM1 432 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 OGTO15294 1046 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 ZC3H11AO75152 810 aaKnown RBP eCLIP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 TUBB4AP04350 444 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 MYL3P08590 195 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 MCF2P10911 925 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 HSPA6P17066 643 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 CASP14P31944 242 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 GRK4P32298 578 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 KRT9P35527 623 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 FXR1P51114 621 aaKnown RBP eCLIP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 GPC3P51654 580 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 CYP24A1Q07973 514 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 NCBP1Q09161 790 aaKnown RBP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 DRP2Q13474 957 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 PRPF4BQ13523 1007 aaKnown RBP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 NOLC1Q14978 699 aaKnown RBP eCLIP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 DCAF17Q5H9S7 520 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 TCERG1LQ5VWI1 586 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 MPZL3Q6UWV2 235 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 CYP26C1Q6V0L0 522 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 RSPH3Q86UC2 560 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 CREBRFQ8IUR6 639 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 TMEM139Q8IV31 216 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 C7orf31Q8N865 590 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 PARD3BQ8TEW8 1205 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 TRAPPC12Q8WVT3 735 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 TSPAN18Q96SJ8 248 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 BAG1Q99933 345 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 GCOM2Q9BZD3 368 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-216ENST00000502848 TMEM8AQ9HCN3 771 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 PTPRHQ9HD43 1115 aa9.87□□□□□ -0.83
NR1I3-216ENST00000502848 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms