RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 LRFN2Q9ULH4 789 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 PCDHB2Q9Y5E7 798 aa11.81□□□□□ -0.52
UBE2D3-212ENST00000502563 FNDC1Q4ZHG4 1894 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 PVALEFA0A1B0GWK0 134 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 POLR2DO15514 142 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 TOM1L1O75674 476 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 PFKFB1P16118 471 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 FGFR4P22455 802 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 RABGGTBP53611 331 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 EHHADHQ08426 723 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 FOXD4L6Q3SYB3 417 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 FOXD4L3Q6VB84 417 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 TAS1R3Q7RTX0 852 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 HAUS6Q7Z4H7 955 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 MAP4K3Q8IVH8 894 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 FAM178BQ8IXR5 827 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 CCDC34Q96HJ3 373 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 CASD1Q96PB1 797 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 ACO2Q99798 780 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 KANSL3Q9P2N6 904 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 GIT1Q9Y2X7 761 aa11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-212ENST00000502563 CHD9Q3L8U1 2897 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 CCDC169A6NNP5 214 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 ACTN4O43707 911 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 KRT18P05783 430 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 STRN3Q13033 797 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 BTG3Q14201 252 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 KYAT1Q16773 422 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 ATF7IP2Q5U623 682 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 KANK3Q6NY19 840 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 UNC13DQ70J99 1090 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 CEP57L1Q8IYX8 460 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 MYCT1Q8N699 235 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 PDILTQ8N807 584 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 SMG8Q8ND04 991 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 DHX58Q96C10 678 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 IPO9Q96P70 1041 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 TSPAN18Q96SJ8 248 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 NKX2-4Q9H2Z4 354 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 PDZD7Q9H5P4 517 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 STK39Q9UEW8 545 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 IPPQ9Y573 584 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 STYXL1Q9Y6J8 313 aa11.79□□□□□ -0.52
UBE2D3-212ENST00000502563 LCHNA4D1U4 455 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 ABLIM1O14639 778 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 SLC16A4O15374 487 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 B4GALT5O43286 388 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 UPP2O95045 317 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 MCF2P10911 925 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 MYOGP15173 224 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 BMPR1AP36894 532 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 SYKP43405 635 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 UBE3AQ05086 875 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 MCL1Q07820 350 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 CLLU1OSQ5K130 101 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 NT5DC1Q5TFE4 455 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 GLB1LQ6UWU2 654 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 AGMOQ6ZNB7 445 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 STXBP4Q6ZWJ1 553 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 ABI1Q8IZP0 508 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 TMEM174Q8WUU8 243 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 TIGD1Q96MW7 591 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 KIFC3Q9BVG8 833 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 TRIM6Q9C030 488 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 RSAD1Q9HA92 442 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 TBX20Q9UMR3 447 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 UBE4BO95155 1302 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 CHD7Q9P2D1 2997 aa11.78□□□□□ -0.52
UBE2D3-212ENST00000502563 NPHP3-ACAD11A0A0J9YXS1 232 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 SFI1A8K8P3 1242 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 H3BNC9 293 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 K7ENM7 598 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 OFD1O75665 1012 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 EDN1P05305 212 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 LAG3P18627 525 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 PPM1AP35813 382 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 SNRPFP62306 86 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 RAD51AP2Q09MP3 1159 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 PSMD2Q13200 908 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 XKR4Q5GH76 650 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 MPZL3Q6UWV2 235 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 TMCO2Q7Z6W1 182 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 TMEM192Q8IY95 271 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 ENGASEQ8NFI3 743 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 C11orf84Q9BUA3 381 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 EIF2AQ9BY44 585 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 TMEM206Q9H813 350 aa11.77□□□□□ -0.53
UBE2D3-212ENST00000502563 PANK4Q9NVE7 773 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms