RNA–Protein interactions for RNA: ENST00000501704.3

TSC22D1-211, Transcript of TSC22 domain family member 1, humanhuman

TSL 2 BASIC

Gene TSC22D1, Length 4,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-211ENST00000501704 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 RPS6KC1Q96S38 1066 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 SMC6Q96SB8 1091 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 INTS2Q9H0H0 1204 aaKnown RBP16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 VPS37BQ9H9H4 285 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 ZFP69BQ9UJL9 534 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 AJAP1Q9UKB5 411 aaPredicted RBP16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 C2CD2Q9Y426 696 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 PNMA6FA0A0J9YX94 578 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 CDH16O75309 829 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 MED24O75448 989 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 LINGO3P0C6S8 592 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 EPHB2P29323 1055 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 RFC5P40937 340 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 FMO5P49326 533 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 POU5F1Q01860 360 aaKnown RBP16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 BTG4Q9NY30 223 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 CYP39A1Q9NYL5 469 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 RABGAP1Q9Y3P9 1069 aa16.04■□□□□ 0.16
TSC22D1-211ENST00000501704 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 TROVE2P10155 538 aaKnown RBP eCLIP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 NT5C2P49902 561 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 CDR2Q01850 454 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 TRMT1LQ7Z2T5 733 aaKnown RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 SLC13A5Q86YT5 568 aaPredicted RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 DTX3LQ8TDB6 740 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 NKX1-2Q9UD57 310 aaPredicted RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 PEX5P50542 639 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 KCTD1Q719H9 257 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 ECHDC2Q86YB7 292 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 WNT8AQ9H1J5 351 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 EPB41L4BQ9H329 900 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 DCTN4Q9UJW0 460 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 CAMTA1Q9Y6Y1 1673 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 FAM47DPA6NHR8 397 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 LMNAP02545 664 aaKnown RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 PYGMP11217 842 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 MFN1Q8IWA4 741 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 ZNF526Q8TF50 670 aaPredicted RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 HAS1Q92839 578 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 TXLNGYQ9BZA5 131 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 PHTF1Q9UMS5 762 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 TRAF3IP3Q9Y228 551 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 EEF2P13639 858 aaKnown RBP16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 ALADP13716 330 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 RANBP1P43487 201 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 C6orf163Q5TEZ5 329 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 MIGA2Q7L4E1 593 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 CLEC10AQ8IUN9 316 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 KIAA0825Q8IV33 1275 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 SNF8Q96H20 258 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 BTBD6Q96KE9 485 aa16.03■□□□□ 0.16
TSC22D1-211ENST00000501704 ENTPD5O75356 428 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 VCAM1P19320 739 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 NMT1P30419 496 aaKnown RBP16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 RFC4P35249 363 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 CETN2P41208 172 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 POLGP54098 1239 aaPredicted RBP16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 MTFR1Q15390 333 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 LRRC23Q53EV4 343 aaPredicted RBP16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 HP1BP3Q5SSJ5 553 aaPredicted RBP16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 TTC27Q6P3X3 843 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 FAM178BQ8IXR5 827 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 APEX2Q9UBZ4 518 aa16.02■□□□□ 0.16
TSC22D1-211ENST00000501704 FOXN3O00409 490 aaPredicted RBP16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 SLC16A3O15427 465 aaKnown RBP16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 GJB6O95452 261 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 CBX6O95503 412 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 ATP6V1C1P21283 382 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 PTDSS1P48651 473 aaKnown RBP16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 ITGA8P53708 1063 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 PSMC6P62333 389 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 GIT2Q14161 759 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 PDCD2Q16342 344 aaPredicted RBP16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 PCYOX1Q9UHG3 505 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 PCDHA1Q9Y5I3 950 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 SPDYE5A6NIY4 337 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 ANKRD63C9JTQ0 380 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 TTC4O95801 387 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 FESP07332 822 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 CNGA1P29973 690 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 ABL2P42684 1182 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 PTGIRP43119 386 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 ROR2Q01974 943 aaKnown RBP16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 KCNA1Q09470 495 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 GALNTL6Q49A17 601 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 RNF43Q68DV7 783 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 CCDC62Q6P9F0 684 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 PPM1KQ8N3J5 372 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 ZNF564Q8TBZ8 553 aaPredicted RBP16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 TMEM109Q9BVC6 243 aa16.02■□□□□ 0.15
TSC22D1-211ENST00000501704 NUP85Q9BW27 656 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms