RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 FNTAP49354 379 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 STX4Q12846 297 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 TESK2Q96S53 571 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 AVENQ9NQS1 362 aaPredicted RBP11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 NAA35Q5VZE5 725 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 PLEKHA4Q9H4M7 779 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 DPYDQ12882 1025 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 TCEAL5Q5H9L2 206 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 ARMC4Q5T2S8 1044 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 NT5DC4Q86YG4 428 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 OXCT2Q9BYC2 517 aaPredicted RBP11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 RIMS2Q9UQ26 1411 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 NPC1L1Q9UHC9 1359 aa11.82□□□□□ -0.52
AC055713.1-201ENST00000498967 EIF3HO15372 352 aaKnown RBP eCLIP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 AKAP10O43572 662 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 MBD4O95243 580 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 GPR1P46091 355 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 SF3B3Q15393 1217 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 FAM26FQ5R3K3 315 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 RWDD4Q6NW29 188 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 CEP44Q9C0F1 390 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 MAN1C1Q9NR34 630 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 BFARQ9NZS9 450 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 TNPO2O14787 897 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 ASNA1O43681 348 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 HIST1H2AGP0C0S8 130 aaPredicted RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 HIST1H2ADP20671 130 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 LIN54Q6MZP7 749 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 ZBTB33Q86T24 672 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 CCDC36Q8IYA8 594 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 HIST1H2AHQ96KK5 128 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 HIST1H2AJQ99878 128 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 H2AFJQ9BTM1 129 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 PDP2Q9P2J9 529 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 OR52Z1P0C646 297 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 RCVRNP35243 200 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 EIF4A2Q14240 407 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 ABRAXAS1Q6UWZ7 409 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 ELMO2Q96JJ3 720 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 GCNT4Q9P109 453 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 CALB1P05937 261 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 STX5Q13190 355 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 C6orf10Q5SRN2 563 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 CCNYL1Q8N7R7 359 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 PSMA8Q8TAA3 256 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 FAM129BQ96TA1 746 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 ZNF304Q9HCX3 659 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 NOVA2Q9UNW9 492 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 PDE5AO76074 875 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 DDAH1O94760 285 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 RRM2P31350 389 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 PGM1P36871 562 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 PDZK1Q5T2W1 519 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 WDR36Q8NI36 951 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 TPRP12270 2363 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 UHRF1BP1Q6BDS2 1440 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 POU5F1BQ06416 359 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 DHX34Q14147 1143 aaKnown RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 TIGD7Q6NT04 549 aaPredicted RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 CALML6Q8TD86 181 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 KIF24Q5T7B8 1368 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 SHANK2Q9UPX8 1470 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 POTECB2RU33 542 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 LRRC8DQ7L1W4 858 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 CCDC60Q8IWA6 550 aaPredicted RBP11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
AC055713.1-201ENST00000498967 NR2F2P24468 414 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 YWHABP31946 246 aaKnown RBP11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 MLH1P40692 756 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 CENPAP49450 140 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 CCDC157Q569K6 752 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 SPDYAQ5MJ70 313 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 KIAA0408Q6ZU52 694 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 RHPN2Q8IUC4 686 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 ATAD3AQ9NVI7 634 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 GUCY1B2O75343 617 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 FKBP9O95302 570 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 RPN2P04844 631 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 SERPING1P05155 500 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 FKBP9P1Q75LS8 142 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 RGS18Q9NS28 235 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 GINM1Q9NU53 330 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 ARPP21Q9UBL0 812 aaPredicted RBP11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 ABCC10Q5T3U5 1492 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 MEI4A8MW99 385 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 VAMP4O75379 141 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 PTPN1P18031 435 aaKnown RBP11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 SERPINB8P50452 374 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 EDRF1Q3B7T1 1238 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 MTHFD1LQ6UB35 978 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 C8orf58Q8NAV2 365 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 MED26O95402 600 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 MAGEA10P43363 369 aaPredicted RBP11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 MAN2A1Q16706 1144 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 TSHZ3Q63HK5 1081 aa11.8□□□□□ -0.52
AC055713.1-201ENST00000498967 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms