RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TMEM175Q9BSA9 504 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 TRAIPQ9BWF2 469 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 ZMYND12Q9H0C1 365 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 MINDY3Q9H8M7 445 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 DPP7Q9UHL4 492 aa10.23□□□□□ -0.77
CCDC171-209ENST00000498725 MTF2Q9Y483 593 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-209ENST00000498725 TGM5O43548 720 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 ITGA4P13612 1032 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 CPA1P15085 419 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 FSHRP23945 695 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 MLH1P40692 756 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 SCNN1GP51170 649 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 ATXN1P54253 815 aaKnown RBP10.22□□□□□ -0.77
CCDC171-209ENST00000498725 NPEPPSP55786 919 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 FGD1P98174 961 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 CDC42EP1Q00587 391 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 UBXN11Q5T124 520 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 KIAA0319Q5VV43 1072 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 GRASPQ7Z6J2 395 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-209ENST00000498725 MRPL10Q7Z7H8 261 aaKnown RBP10.22□□□□□ -0.77
CCDC171-209ENST00000498725 TEX2Q8IWB9 1127 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 CCDC12Q8WUD4 166 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-209ENST00000498725 ATRIPQ8WXE1 791 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 RSPH1Q8WYR4 309 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 SLC5A5Q92911 643 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 FGF14Q92915 247 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 NXPE3Q969Y0 559 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 TMEM143Q96AN5 459 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 SHDQ96IW2 340 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 CPB2Q96IY4 423 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 CEP89Q96ST8 783 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 GAD1Q99259 594 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 KXD1Q9BQD3 176 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 NIFKQ9BYG3 293 aaKnown RBP10.22□□□□□ -0.77
CCDC171-209ENST00000498725 BCO2Q9BYV7 579 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 IFT122Q9HBG6 1241 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 AGPAT5Q9NUQ2 364 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 MIOSQ9NXC5 875 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC171-209ENST00000498725 KANSL3Q9P2N6 904 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 STK39Q9UEW8 545 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
CCDC171-209ENST00000498725 POLIQ9UNA4 740 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 HES2Q9Y543 173 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 COL4A3BPQ9Y5P4 624 aa10.22□□□□□ -0.77
CCDC171-209ENST00000498725 DNAH14Q0VDD8 3507 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 IGKV6-21A0A0C4DH24 114 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 KANSL1LA0AUZ9 987 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 ESYT2A0FGR8 921 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 ARL5CA6NH57 179 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 FAM170BA6NMN3 283 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 ANHXE9PGG2 379 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 ATMINO43313 823 aaPredicted RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 EDIL3O43854 480 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 MAFO75444 373 aaPredicted RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 STBD1O95210 358 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 GNA11P29992 359 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 CIITAP33076 1130 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 STARD6P59095 220 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 EXOSC10Q01780 885 aaKnown RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 AKAP17AQ02040 695 aaKnown RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 LPAL2Q16609 132 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 ADCK5Q3MIX3 580 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 PRSS55Q6UWB4 352 aaPredicted RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 CYP26C1Q6V0L0 522 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 COLGALT2Q8IYK4 626 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 SMG8Q8ND04 991 aaKnown RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 PRPF31Q8WWY3 499 aaKnown RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 CHAMP1Q96JM3 812 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 ZFP42Q96MM3 310 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 RIT2Q99578 217 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 EIF2AQ9BY44 585 aaKnown RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 PRKD2Q9BZL6 878 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 RXFP1Q9HBX9 757 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 SLC2A4RGQ9NR83 387 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 CACNG4Q9UBN1 327 aa10.21□□□□□ -0.77
CCDC171-209ENST00000498725 SMG5Q9UPR3 1016 aaKnown RBP10.21□□□□□ -0.77
CCDC171-209ENST00000498725 CNTNAP2Q9UHC6 1331 aa10.21□□□□□ -0.78
CCDC171-209ENST00000498725 KMT2BQ9UMN6 2715 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-209ENST00000498725 RALGAPA1Q6GYQ0 2036 aa10.21□□□□□ -0.78
CCDC171-209ENST00000498725 CCL16O15467 120 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 PSMD10O75832 226 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 ERLIN2O94905 339 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 TDP2O95551 362 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 NCLP19338 710 aaKnown RBP10.2□□□□□ -0.78
CCDC171-209ENST00000498725 HOXA11P31270 313 aaPredicted RBP10.2□□□□□ -0.78
CCDC171-209ENST00000498725 CACNA1BQ00975 2339 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 DSG1Q02413 1049 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 MLF2Q15773 248 aaPredicted RBP10.2□□□□□ -0.78
CCDC171-209ENST00000498725 ST3GAL2Q16842 350 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 SLC44A4Q53GD3 710 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 RNF20Q5VTR2 975 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 ANO5Q75V66 913 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
CCDC171-209ENST00000498725 BICD2Q8TD16 824 aa10.2□□□□□ -0.78
CCDC171-209ENST00000498725 TBCKQ8TEA7 893 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms