RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 TIPINQ9BVW5 301 aa17.76■□□□□ 0.43
LMNA-217ENST00000498722 GTPBP4Q9BZE4 634 aaKnown RBP17.76■□□□□ 0.43
LMNA-217ENST00000498722 C2orf40Q9H1Z8 148 aa17.76■□□□□ 0.43
LMNA-217ENST00000498722 KBTBD4Q9NVX7 518 aa17.76■□□□□ 0.43
LMNA-217ENST00000498722 MTMR10Q9NXD2 777 aa17.76■□□□□ 0.43
LMNA-217ENST00000498722 TRIP11Q15643 1979 aa17.76■□□□□ 0.43
LMNA-217ENST00000498722 ADGRA3Q8IWK6 1321 aa17.76■□□□□ 0.43
LMNA-217ENST00000498722 NPHP3-ACAD11A0A0J9YXS1 232 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 LINC01553A4QN01 128 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 SFI1A8K8P3 1242 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 IKBKBO14920 756 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 DGKIO75912 1065 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 GUCY2CP25092 1073 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 GATMP50440 423 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 PCBP1Q15365 356 aaKnown RBP eCLIP17.75■□□□□ 0.432e-6■□□□□ 9
LMNA-217ENST00000498722 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 ECHDC2Q86YB7 292 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 IFNLR1Q8IU57 520 aaPredicted RBP17.75■□□□□ 0.43
LMNA-217ENST00000498722 DHX40Q8IX18 779 aaKnown RBP17.75■□□□□ 0.43
LMNA-217ENST00000498722 FIBCD1Q8N539 461 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 AOPEPQ8N6M6 819 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 LRRC15Q8TF66 581 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 CPB2Q96IY4 423 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 NFKBIZQ9BYH8 718 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 ZHX3Q9H4I2 956 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 PRDM12Q9H4Q4 367 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 BLOC1S4Q9NUP1 217 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 TMEM161AQ9NX61 479 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 KCND2Q9NZV8 630 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 CHD7Q9P2D1 2997 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 COL4A6Q14031 1691 aa17.75■□□□□ 0.43
LMNA-217ENST00000498722 TBKBP1A7MCY6 615 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 TSPAN1O60635 241 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 FGFR1P11362 822 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 PLCB2Q00722 1185 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 MAPK6Q16659 721 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 CDCA2Q69YH5 1023 aaPredicted RBP17.74■□□□□ 0.43
LMNA-217ENST00000498722 ISM2Q6H9L7 571 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 NOTUMQ6P988 496 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 ABI1Q8IZP0 508 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
LMNA-217ENST00000498722 GUCD1Q96NT3 240 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 TGS1Q96RS0 853 aaKnown RBP17.74■□□□□ 0.43
LMNA-217ENST00000498722 CDX2Q99626 313 aaPredicted RBP17.74■□□□□ 0.43
LMNA-217ENST00000498722 KMT5AQ9NQR1 393 aa17.74■□□□□ 0.43
LMNA-217ENST00000498722 PRMT7Q9NVM4 692 aaPredicted RBP17.74■□□□□ 0.43
LMNA-217ENST00000498722 A0A0U1RQF3 1178 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 B4GALT5O43286 388 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 TBCAO75347 108 aaKnown RBP17.73■□□□□ 0.43
LMNA-217ENST00000498722 FAM13AO94988 1023 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 ADCY5O95622 1261 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 PRKCBP05771 671 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 SKIP12755 728 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 AXLP30530 894 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 NPTX2P47972 431 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 RAB27AP51159 221 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 EFNA5P52803 228 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 KCNB1Q14721 858 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 SV2BQ7L1I2 683 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 SPRED2Q7Z698 418 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 DAW1Q8N136 415 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 MYLIPQ8WY64 445 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 GAS2L1Q99501 681 aaPredicted RBP17.73■□□□□ 0.43
LMNA-217ENST00000498722 REEP2Q9BRK0 252 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 TRIM6Q9C030 488 aaPredicted RBP17.73■□□□□ 0.43
LMNA-217ENST00000498722 ELAC1Q9H777 363 aaKnown RBP17.73■□□□□ 0.43
LMNA-217ENST00000498722 FAM105AQ9NUU6 356 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 CITO14578 2027 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 TRANK1O15050 2925 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 PLXNA4Q9HCM2 1894 aa17.73■□□□□ 0.43
LMNA-217ENST00000498722 SLC16A4O15374 487 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 HOXA2O43364 376 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 RPN1P04843 607 aaKnown RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 ARF4P18085 180 aaPredicted RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 HOXA11P31270 313 aaPredicted RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 SMTNP53814 917 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 FAM189BP81408 668 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 MYL5Q02045 173 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 MAPK7Q13164 816 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 PRPF4BQ13523 1007 aaKnown RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 CUL4BQ13620 913 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 ARSHQ5FYA8 562 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 SPOUT1Q5T280 376 aaKnown RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 SARM1Q6SZW1 724 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 CMTR2Q8IYT2 770 aaKnown RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 CRIPAKQ8N1N5 446 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 SP7Q8TDD2 431 aaPredicted RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 STAMQ92783 540 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 ZNF689Q96CS4 500 aaPredicted RBP17.72■□□□□ 0.43
LMNA-217ENST00000498722 C7orf25Q9BPX7 421 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 C17orf80Q9BSJ5 609 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 C17orf75Q9HAS0 396 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 ODF2LQ9ULJ1 636 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 PCDHB2Q9Y5E7 798 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 K7ERI5 159 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 EOMESO95936 686 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 PLS3P13797 630 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 FOSL2P15408 326 aa17.72■□□□□ 0.43
LMNA-217ENST00000498722 IGFBP4P22692 258 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms