RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 C12orf76Q8N812 135 aaPredicted RBP6.4□□□□□ -1.38
SPTA1-209ENST00000498708 DNERQ8NFT8 737 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 RASGRP4Q8TDF6 673 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 SYTL5Q8TDW5 730 aaPredicted RBP6.4□□□□□ -1.38
SPTA1-209ENST00000498708 LINC01599Q8WXQ3 324 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 BHMTQ93088 406 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 NECTIN4Q96NY8 510 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 RMDN3Q96TC7 470 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 ANP32EQ9BTT0 268 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 KATNAL1Q9BW62 490 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 RNPEPQ9H4A4 650 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 KAT14Q9H8E8 782 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 TBC1D17Q9HA65 648 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 KCNK12Q9HB15 430 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 TCP11L1Q9NUJ3 509 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 DDX41Q9UJV9 622 aaKnown RBP6.4□□□□□ -1.38
SPTA1-209ENST00000498708 SMG5Q9UPR3 1016 aaKnown RBP6.4□□□□□ -1.38
SPTA1-209ENST00000498708 MRVI1Q9Y6F6 885 aa6.4□□□□□ -1.38
SPTA1-209ENST00000498708 CCDC171Q6TFL3 1326 aa6.4□□□□□ -1.39
SPTA1-209ENST00000498708 WDR19Q8NEZ3 1342 aa6.4□□□□□ -1.39
SPTA1-209ENST00000498708 DENND4AQ7Z401 1863 aa6.4□□□□□ -1.39
SPTA1-209ENST00000498708 IGSF10Q6WRI0 2623 aa6.4□□□□□ -1.39
SPTA1-209ENST00000498708 FNDC1Q4ZHG4 1894 aaPredicted RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 RALGAPA1Q6GYQ0 2036 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 C17orf102A2RUQ5 167 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 SRRM3A6NNA2 597 aaPredicted RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 TAF4O00268 1085 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 FGF18O76093 207 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 SRGAP2BP0DMP2 458 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 SNHG28P0DPA3 235 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 NID1P14543 1247 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 NCLP19338 710 aaKnown RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 SDSP20132 328 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 HOXC8P31273 242 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 UBE3AQ05086 875 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 LPIN1Q14693 890 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 STXBP2Q15833 593 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 RARS2Q5T160 578 aaKnown RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 GPATCH4Q5T3I0 446 aaKnown RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 CWC27Q6UX04 472 aaKnown RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 UNQ6494/PRO21346Q6UXR6 183 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 C20orf204Q6ZNR8 217 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 HOMER1Q86YM7 354 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 NETO1Q8TDF5 533 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 NSUN6Q8TEA1 469 aaKnown RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 RSAD2Q8WXG1 361 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 PIBF1Q8WXW3 757 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 ESR2Q92731 530 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 TTC14Q96N46 770 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 C16orf70Q9BSU1 422 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 RNF41Q9H4P4 317 aaPredicted RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 CYP26B1Q9NR63 512 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 TMEM260Q9NX78 707 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 DBR1Q9UK59 544 aaKnown RBP6.39□□□□□ -1.39
SPTA1-209ENST00000498708 USTQ9Y2C2 406 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 SIT1Q9Y3P8 196 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 ABCB11O95342 1321 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 COL4A3Q01955 1670 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 PATJQ8NI35 1801 aa6.39□□□□□ -1.39
SPTA1-209ENST00000498708 LOXHD1Q8IVV2 1947 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 FSD2A1L4K1 749 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 PARP1P09874 1014 aaKnown RBP6.38□□□□□ -1.39
SPTA1-209ENST00000498708 SMIM10L2AP0DMW4 78 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 SMIM10L2BP0DMW5 78 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 EPB42P16452 691 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 RFX1P22670 979 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 HOXA13P31271 388 aaPredicted RBP6.38□□□□□ -1.39
SPTA1-209ENST00000498708 MTHFRP42898 656 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 ITIH3Q06033 890 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 PCSK7Q16549 785 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 HSDL1Q3SXM5 330 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 SOWAHCQ53LP3 525 aaPredicted RBP6.38□□□□□ -1.39
SPTA1-209ENST00000498708 KIAA1841Q6NSI8 718 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 IQCA1Q86XH1 822 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 DGKHQ86XP1 1220 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 MCF2L2Q86YR7 1114 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 PPTC7Q8NI37 304 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 SECISBP2LQ93073 1101 aaKnown RBP6.38□□□□□ -1.39
SPTA1-209ENST00000498708 CALR3Q96L12 384 aaKnown RBP6.38□□□□□ -1.39
SPTA1-209ENST00000498708 PNMA5Q96PV4 448 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 TCF25Q9BQ70 676 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 FOXQ1Q9C009 403 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 EPC1Q9H2F5 836 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 BCAS3Q9H6U6 928 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 EHMT1Q9H9B1 1298 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 JMJD4Q9H9V9 463 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 PXMP2Q9NR77 195 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 DIAPH3Q9NSV4 1193 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 SETD4Q9NVD3 440 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 WNT16Q9UBV4 365 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 PNMA2Q9UL42 364 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 MRPL11Q9Y3B7 192 aaKnown RBP6.38□□□□□ -1.39
SPTA1-209ENST00000498708 HCFC2Q9Y5Z7 792 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 MIA3Q5JRA6 1907 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 C2orf16Q68DN1 1984 aa6.38□□□□□ -1.39
SPTA1-209ENST00000498708 KAT6AQ92794 2004 aa6.37□□□□□ -1.39
SPTA1-209ENST00000498708 TGFBR3LH3BV60 316 aa6.37□□□□□ -1.39
SPTA1-209ENST00000498708 CLASP2O75122 1294 aaKnown RBP6.37□□□□□ -1.39
SPTA1-209ENST00000498708 CAND2O75155 1236 aa6.37□□□□□ -1.39
SPTA1-209ENST00000498708 PPFIA4O75335 1185 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms