RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 RCSD1Q6JBY9 416 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 CDH24Q86UP0 819 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 SLC44A5Q8NCS7 719 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 RAET1EQ8TD07 263 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 FAM151AQ8WW52 585 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 PHKBQ93100 1093 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 SPATA32Q96LK8 384 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 ASB2Q96Q27 587 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 TMEM47Q9BQJ4 181 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 IL17RBQ9NRM6 502 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 BIN2Q9UBW5 565 aaPredicted RBP6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 ZNF70Q9UC06 446 aaPredicted RBP6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 STX8Q9UNK0 236 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 CYP8B1Q9UNU6 501 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 CNPY2Q9Y2B0 182 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 YBX2Q9Y2T7 364 aaKnown RBP6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 PLIN4Q96Q06 1357 aa6.06□□□□□ -1.44
HMGXB4-208ENST00000498325 DDX60LQ5H9U9 1706 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 ELP1O95163 1332 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 FITM1A5D6W6 292 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 MPHOSPH10O00566 681 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 FIBPO43427 364 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 TLR2O60603 784 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 FBXO24O75426 580 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 TTLL1O95922 423 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 ADRB1P08588 477 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 PARP1P09874 1014 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 ZGLP1P0C6A0 271 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 SMARCA1P28370 1054 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 GSTT1P30711 240 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 SHMT1P34896 483 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 PSMC4P43686 418 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 NOVP48745 357 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 UBXN2AP68543 259 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 TNFAIP1Q13829 316 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 SSPNQ14714 243 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 KIF22Q14807 665 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 GRM4Q14833 912 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 CERKLQ49MI3 558 aaPredicted RBP6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 KRT40Q6A162 431 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 TATDN1Q6P1N9 297 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 TMTC3Q6ZXV5 915 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 NECAB2Q7Z6G3 386 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 FAM83AQ86UY5 434 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 FAM177A1Q8N128 213 aaPredicted RBP6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 OPTNQ96CV9 577 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 TRIT1Q9H3H1 467 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 TMPRSS5Q9H3S3 457 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 BRMS1Q9HCU9 246 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 CABP5Q9NP86 173 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 MTMR4Q9NYA4 1195 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 HERC5Q9UII4 1024 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 PIEZO1Q92508 2521 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 ATRNL1Q5VV63 1379 aa6.05□□□□□ -1.44
HMGXB4-208ENST00000498325 MYPNQ86TC9 1320 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 MYH8P13535 1937 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CCL15-CCL14A0A0B4J2E2 113 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 IGKV6D-41A0A0C4DH26 115 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 DDTLA6NHG4 134 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 OTOL1A6NHN0 477 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 TCP10L2B9ZVM9 353 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 USP2O75604 605 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 LETM1O95202 739 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 MMP1P03956 469 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 AKR1B1P15121 316 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 U2AF2P26368 475 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CACNB3P54284 484 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 PRKCZQ05513 592 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 EGR3Q06889 387 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 SF3A1Q15459 793 aaKnown RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CCL15Q16663 113 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 ABCB5Q2M3G0 1257 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 GAB4Q2WGN9 574 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 ASPRV1Q53RT3 343 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 FAM173BQ6P4H8 233 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 TMEM179Q6ZVK1 233 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 METTL16Q86W50 562 aaKnown RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 ZFPM1Q8IX07 1006 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 SRBD1Q8N5C6 995 aaKnown RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CCDC12Q8WUD4 166 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 LEO1Q8WVC0 666 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 ATXN2LQ8WWM7 1075 aaKnown RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CEP95Q96GE4 821 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 RBCK1Q9BYM8 510 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 DUSP15Q9H1R2 295 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 FOXP1Q9H334 677 aaPredicted RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 KANSL2Q9H9L4 492 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 VEZTQ9HBM0 779 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 NYAP2Q9P242 653 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CLIP2Q9UDT6 1046 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CPA4Q9UI42 421 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 DUSP13Q9UII6 198 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 RCOR1Q9UKL0 485 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 ISY1Q9ULR0 285 aaKnown RBP6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 PPM1HQ9ULR3 514 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 GABRQQ9UN88 632 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 PCDHAC2Q9Y5I4 1007 aa6.04□□□□□ -1.44
HMGXB4-208ENST00000498325 CLRN2A0PK11 232 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms