RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 C12orf56Q8IXR9 622 aa19.24■□□□□ 0.67
CTDSP1-215ENST00000498160 HPS3Q969F9 1004 aa19.24■□□□□ 0.67
CTDSP1-215ENST00000498160 SCLYQ96I15 445 aa19.24■□□□□ 0.67
CTDSP1-215ENST00000498160 AGO3Q9H9G7 860 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-215ENST00000498160 IL23AQ9NPF7 189 aa19.24■□□□□ 0.67
CTDSP1-215ENST00000498160 TRAF3IP3Q9Y228 551 aa19.24■□□□□ 0.67
CTDSP1-215ENST00000498160 CLDN3O15551 220 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 BAIAP3O94812 1187 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 LDHAP00338 332 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 ARF4P18085 180 aaPredicted RBP19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 CCNE1P24864 410 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 RPL13P26373 211 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 POU5F1Q01860 360 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 PAK1Q13153 545 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 IKBKEQ14164 716 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 EDRF1Q3B7T1 1238 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 MPZL3Q6UWV2 235 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 RSPH1Q8WYR4 309 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 FGFBP2Q9BYJ0 223 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 MTIF3Q9H2K0 278 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 STYXL1Q9Y6J8 313 aa19.23■□□□□ 0.67
CTDSP1-215ENST00000498160 ABHD14A-ACY1A0A1B0GW23 586 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 SYCE3A1L190 88 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 FGFR1OPO95684 399 aaKnown RBP19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 MCF2P10911 925 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 TYRO3Q06418 890 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 TWF2Q6IBS0 349 aaKnown RBP19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 CENPPQ6IPU0 288 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 P2RX5Q93086 422 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 TCHPQ9BT92 498 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 TARS2Q9BW92 718 aaKnown RBP19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 TRIM6Q9C030 488 aaPredicted RBP19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 KCTD10Q9H3F6 313 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 KIAA1586Q9HCI6 787 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 LTBP2Q14767 1821 aa19.22■□□□□ 0.67
CTDSP1-215ENST00000498160 ZMYM2Q9UBW7 1377 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 PPP1R3GB7ZBB8 358 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 CSDE1O75534 798 aaKnown RBP19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 CSF2RAP15509 400 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 BMP6P22004 513 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 PROZP22891 400 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 HOXA11P31270 313 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 MATR3P43243 847 aaKnown RBP eCLIP19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 MCL1Q07820 350 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 NOLC1Q14978 699 aaKnown RBP eCLIP19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 ZNF568Q3ZCX4 644 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 ISM2Q6H9L7 571 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 ARMCX5Q6P1M9 558 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 SLC9A9Q8IVB4 645 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 DBF4BQ8NFT6 615 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 TSPYL2Q9H2G4 693 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 PDZD7Q9H5P4 517 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 PTPRHQ9HD43 1115 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 RGS18Q9NS28 235 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 RWDD2AQ9UIY3 292 aa19.21■□□□□ 0.67
CTDSP1-215ENST00000498160 B4GALT5O43286 388 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 FGFR4P22455 802 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 ITGB8P26012 769 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 DSC3Q14574 896 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 DPCR1Q3MIW9 517 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 SLC24A5Q71RS6 500 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 DEFB128Q7Z7B8 93 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 SMYD4Q8IYR2 804 aaPredicted RBP19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 GLIS3Q8NEA6 775 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 NELFBQ8WX92 580 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 POMGNT1Q8WZA1 660 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 BADQ92934 168 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 PGBD4Q96DM1 585 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.2■□□□□ 0.66
CTDSP1-215ENST00000498160 ZNF623O75123 536 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 FKBP3Q00688 224 aaKnown RBP19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 KCNA1Q09470 495 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 GPNMBQ14956 572 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 NOC3LQ8WTT2 800 aaKnown RBP19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 ADAM2Q99965 735 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 BPIFA3Q9BQP9 254 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 MSTO1Q9BUK6 570 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 ELAC1Q9H777 363 aaKnown RBP19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 UBN1Q9NPG3 1134 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 AGO2Q9UKV8 859 aaKnown RBP19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 ZMYND8Q9ULU4 1186 aaPredicted RBP19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 MAPK8IP1Q9UQF2 711 aa19.19■□□□□ 0.66
CTDSP1-215ENST00000498160 A0A0B4J269 797 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 A0A0U1RQF3 1178 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 CETN3O15182 167 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 MAPK13O15264 365 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 OGTO15294 1046 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 TGFB1I1O43294 461 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 HOXA2O43364 376 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 EOMESO95936 686 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 FGBP02675 491 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 STAG3L1P0CL83 205 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 HOXD13P35453 343 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 ZNF445P59923 1031 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 ZCWPW2Q504Y3 356 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 KLHL10Q6JEL2 608 aa19.18■□□□□ 0.66
CTDSP1-215ENST00000498160 LRSAM1Q6UWE0 723 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms