RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 M0R296 226 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 TSPAN1O60635 241 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 POMCP01189 267 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 XRCC6P12956 609 aaKnown RBP eCLIP13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 ATP2B1P20020 1258 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 MTHFRP42898 656 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 ZBTB33Q86T24 672 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 AUTS2Q8WXX7 1259 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 MTMR9Q96QG7 549 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 EMILIN2Q9BXX0 1053 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 TRIM6Q9C030 488 aaPredicted RBP13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 XPNPEP1Q9NQW7 623 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 IPPQ9Y573 584 aa13.07□□□□□ -0.32
NUDCD3-211ENST00000497978 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 NR1I2O75469 434 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 DDHD2O94830 711 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 MCM7P33993 719 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 ARL2P36404 184 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 RARRES1P49788 294 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 BMP8AQ7Z5Y6 402 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 CABP7Q86V35 215 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 EFCAB3Q8N7B9 438 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 ASAP3Q8TDY4 903 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 PIGOQ8TEQ8 1089 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 PBXIP1Q96AQ6 731 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 LLPHQ9BRT6 129 aaKnown RBP13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 NFKBIZQ9BYH8 718 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 CSRNP2Q9H175 543 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 POLR3FQ9H1D9 316 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 TUFT1Q9NNX1 390 aa13.06□□□□□ -0.32
NUDCD3-211ENST00000497978 POTEMA6NI47 508 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 WNT7AO00755 349 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 NRP1O14786 923 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 USO1O60763 962 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 GLRA2P23416 452 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 KLRC2P26717 231 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 GUCY1B3Q02153 619 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 MBTD1Q05BQ5 628 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 SIGLEC14Q08ET2 396 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 ORC2Q13416 577 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 CAPSQ13938 189 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 PTPN14Q15678 1187 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 PTPN21Q16825 1174 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 ATAT1Q5SQI0 421 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 SUGP1Q8IWZ8 645 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 MCPH1Q8NEM0 835 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 ERMNQ8TAM6 284 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 EIF2AQ9BY44 585 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 POMKQ9H5K3 350 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 MRPL17Q9NRX2 175 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
NUDCD3-211ENST00000497978 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 LRRIQ4A6NIV6 560 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 B4GALT3O60512 393 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 SEC24BO95487 1268 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 URODP06132 367 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 EPCAMP16422 314 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 ARF4P18085 180 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 MLH1P40692 756 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 OR1G1P47890 313 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 CLCN6P51797 869 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 HMGN5P82970 282 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 ST3GAL1Q11201 340 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 C12orf76Q8N812 135 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 SLC22A17Q8WUG5 538 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 FBXL18Q96ME1 805 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 KLHL5Q96PQ7 755 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 NACC1Q96RE7 527 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 GAD1Q99259 594 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 VN1R3Q9BXE9 311 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 FOXP1Q9H334 677 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 DBR1Q9UK59 544 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 GIT1Q9Y2X7 761 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 HES2Q9Y543 173 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 TECTAO75443 2155 aa13.04□□□□□ -0.32
NUDCD3-211ENST00000497978 A0A087WWV3 80 aa13.03□□□□□ -0.32
NUDCD3-211ENST00000497978 INPPL1O15357 1258 aa13.03□□□□□ -0.32
NUDCD3-211ENST00000497978 SOD2P04179 222 aa13.03□□□□□ -0.32
NUDCD3-211ENST00000497978 OR52Z1P0C646 297 aa13.03□□□□□ -0.32
NUDCD3-211ENST00000497978 SPATA31C1P0DKV0 1188 aa13.03□□□□□ -0.32
NUDCD3-211ENST00000497978 TIE1P35590 1138 aa13.03□□□□□ -0.32
NUDCD3-211ENST00000497978 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-211ENST00000497978 ZNF174Q15697 407 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms