RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CHD9Q3L8U1 2897 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 LRRIQ4A6NIV6 560 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 CLCN3P51790 818 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 FILIP1LQ4L180 1135 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 METTL13Q8N6R0 699 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 VWCEQ96DN2 955 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 NAP1L5Q96NT1 182 aaPredicted RBP15.53■□□□□ 0.08
VPS26A-209ENST00000497564 MKNK1Q9BUB5 465 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 CCDC113Q9H0I3 377 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 HIPK3Q9H422 1215 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
VPS26A-209ENST00000497564 SETD4Q9NVD3 440 aa15.53■□□□□ 0.08
VPS26A-209ENST00000497564 EYSQ5T1H1 3165 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 CITO14578 2027 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 SMIM35A0A1B0GVV1 85 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 ACRP10323 421 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 GNAT1P11488 350 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 CCL23P55773 120 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 CDC42EP1Q00587 391 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 HIC1Q14526 733 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 GDF6Q6KF10 455 aaPredicted RBP15.52■□□□□ 0.08
VPS26A-209ENST00000497564 NFRKBQ6P4R8 1299 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 FRMD5Q7Z6J6 570 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 SESTD1Q86VW0 696 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 ZBTB8OSQ8IWT0 167 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 MAP7D2Q96T17 732 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 TUBGCP2Q9BSJ2 902 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 INTS13Q9NVM9 706 aa15.52■□□□□ 0.08
VPS26A-209ENST00000497564 RALGAPA2Q2PPJ7 1873 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 K7ERI5 159 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 CLIC2O15247 247 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 MAPK13O15264 365 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 MTIF2P46199 727 aaKnown RBP15.51■□□□□ 0.07
VPS26A-209ENST00000497564 PTENP60484 403 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 STRN3Q13033 797 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 Q7L0L9 218 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 ZNF410Q86VK4 478 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 KIAA0319LQ8IZA0 1049 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 ZNF710Q8N1W2 664 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 RNF149Q8NC42 400 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 SCLYQ96I15 445 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.07
VPS26A-209ENST00000497564 SEZ6LQ9BYH1 1024 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 IKZF4Q9H2S9 585 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 METTL14Q9HCE5 456 aaKnown RBP15.51■□□□□ 0.07
VPS26A-209ENST00000497564 HDAC6Q9UBN7 1215 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 STYXL1Q9Y6J8 313 aa15.51■□□□□ 0.07
VPS26A-209ENST00000497564 C17orf102A2RUQ5 167 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 LGALS16A8MUM7 142 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 N4BP3O15049 544 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 TPM2P07951 284 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 EPB41P11171 864 aaKnown RBP15.5■□□□□ 0.07
VPS26A-209ENST00000497564 GARTP22102 1010 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 PSMC2P35998 433 aaKnown RBP15.5■□□□□ 0.07
VPS26A-209ENST00000497564 PBX1P40424 430 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 PHKA2P46019 1235 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 MCCD1P59942 119 aaPredicted RBP15.5■□□□□ 0.07
VPS26A-209ENST00000497564 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
VPS26A-209ENST00000497564 PPP2R3AQ06190 1150 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 FAM187BQ17R55 369 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 MIIPQ5JXC2 388 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 TMEM240Q5SV17 173 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 SLC39A4Q6P5W5 647 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 ZPBP2Q6X784 338 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 VSTM4Q8IW00 320 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 TRIM59Q8IWR1 403 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 C7orf31Q8N865 590 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 ZBTB10Q96DT7 871 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 EEF2KMTQ96G04 330 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 TAB2Q9NYJ8 693 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 GTF2IRD1Q9UHL9 959 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 AKT3Q9Y243 479 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
VPS26A-209ENST00000497564 SCN5AQ14524 2016 aa15.5■□□□□ 0.07
VPS26A-209ENST00000497564 TRIP11Q15643 1979 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 CHD7Q9P2D1 2997 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 ANKRD63C9JTQ0 380 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 HNRNPDLO14979 420 aaKnown RBP15.49■□□□□ 0.07
VPS26A-209ENST00000497564 KIAA0391O15091 583 aaKnown RBP15.49■□□□□ 0.07
VPS26A-209ENST00000497564 AKAP3O75969 853 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 SRGAP2CP0DJJ0 459 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
VPS26A-209ENST00000497564 ADSSP30520 456 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 GPC3P51654 580 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 PTGISQ16647 500 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 CCDC40Q4G0X9 1142 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 FAM109BQ6ICB4 259 aaPredicted RBP15.49■□□□□ 0.07
VPS26A-209ENST00000497564 ARMCX5Q6P1M9 558 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 TMEM199Q8N511 208 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 DHX38Q92620 1227 aaKnown RBP15.49■□□□□ 0.07
VPS26A-209ENST00000497564 WNT8BQ93098 351 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 BORCS6Q96GS4 357 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 RNPC3Q96LT9 517 aaKnown RBP15.49■□□□□ 0.07
VPS26A-209ENST00000497564 VPS16Q9H269 839 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 FZD8Q9H461 694 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 IFT122Q9HBG6 1241 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 IMPACTQ9P2X3 320 aa15.49■□□□□ 0.07
VPS26A-209ENST00000497564 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms