RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 MAPK13O15264 365 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 CALUO43852 315 aaPredicted RBP21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 NBNO60934 754 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 ZNF623O75123 536 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 LDHAP00338 332 aaKnown RBP21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 PRKCSHP14314 528 aaPredicted RBP21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 RPL13P26373 211 aaKnown RBP21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 LIG4P49917 911 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 RAB27AP51159 221 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 MCCD1P59942 119 aaPredicted RBP21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 ENPEPQ07075 957 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 PAK1Q13153 545 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 DSC3Q14574 896 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 DCAF4L1Q3SXM0 396 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 ATF7IP2Q5U623 682 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 SEPT8Q92599 483 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 TSG101Q99816 390 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 ADPGKQ9BRR6 497 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 IFIH1Q9BYX4 1025 aaKnown RBP21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 DMAC2Q9NW81 257 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 ALPK3Q96L96 1907 aa21.62■■□□□ 1.05
SCAMP3-209ENST00000497470 ZMYM2Q9UBW7 1377 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 ABLIM1O14639 778 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 CLDN3O15551 220 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 MCF2P10911 925 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 GHRP10912 638 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 CD44P16070 742 aaKnown RBP21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 CYP2C18P33260 490 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 FKBP3Q00688 224 aaKnown RBP21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 KCNA1Q09470 495 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 PPIGQ13427 754 aaKnown RBP eCLIP21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 MPZL3Q6UWV2 235 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 ENOX1Q8TC92 643 aaKnown RBP21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 TARS2Q9BW92 718 aaKnown RBP21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 C1orf112Q9NSG2 853 aa21.61■■□□□ 1.05
SCAMP3-209ENST00000497470 A0A0B4J269 797 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 FGFR1OPO95684 399 aaKnown RBP21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 ZSCAN20P17040 1043 aaPredicted RBP21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 TTI2Q6NXR4 508 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 CNKSR3Q6P9H4 555 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 SLC27A1Q6PCB7 646 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 SMYD4Q8IYR2 804 aaPredicted RBP21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 FBXL18Q96ME1 805 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 MKNK1Q9BUB5 465 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 PPP1R12CQ9BZL4 782 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 SEMA6BQ9H3T3 888 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 AGPAT3Q9NRZ7 376 aa21.6■■□□□ 1.05
SCAMP3-209ENST00000497470 UMODL1Q5DID0 1318 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 IKBKBO14920 756 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 CD52P31358 61 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 FAM189BP81408 668 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 ISM2Q6H9L7 571 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 SLC39A4Q6P5W5 647 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 NOC3LQ8WTT2 800 aaKnown RBP21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 NELFBQ8WX92 580 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 BICD1Q96G01 975 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 ZNF668Q96K58 619 aaPredicted RBP21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 CEP63Q96MT8 703 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 TSPAN18Q96SJ8 248 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 PPP1R16BQ96T49 567 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 TSPYL2Q9H2G4 693 aaPredicted RBP21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 PDZD7Q9H5P4 517 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 RGS18Q9NS28 235 aa21.59■■□□□ 1.05
SCAMP3-209ENST00000497470 A0A0U1RQF3 1178 aa21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 ABHD14A-ACY1A0A1B0GW23 586 aa21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 BAIAP3O94812 1187 aa21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 ADSSP30520 456 aa21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 NFX1Q12986 1120 aaKnown RBP21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 NELFCDQ8IXH7 590 aa21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 ELAC1Q9H777 363 aaKnown RBP21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 IL23AQ9NPF7 189 aa21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 PRDM5Q9NQX1 630 aaPredicted RBP21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 PIN4Q9Y237 131 aaKnown RBP21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.58■■□□□ 1.05
SCAMP3-209ENST00000497470 OGTO15294 1046 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 B4GALT5O43286 388 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 GNA14O95837 355 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 EOMESO95936 686 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 EDN1P05305 212 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 ITGB8P26012 769 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 CCL23P55773 120 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 NOLC1Q14978 699 aaKnown RBP eCLIP21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 SPATA1Q5VX52 437 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 ARMCX5Q6P1M9 558 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 SLC24A5Q71RS6 500 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 MRPL10Q7Z7H8 261 aaKnown RBP21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 HACE1Q8IYU2 909 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 C7orf61Q8IZ16 206 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 DBF4BQ8NFT6 615 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 TMX1Q9H3N1 280 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 MAPK8IP1Q9UQF2 711 aa21.57■■□□□ 1.04
SCAMP3-209ENST00000497470 SMTNL1A8MU46 457 aa21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 ANKRD63C9JTQ0 380 aa21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 CETN3O15182 167 aa21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 CSDE1O75534 798 aaKnown RBP21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 ADRB2P07550 413 aa21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 ZNF165P49910 485 aa21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 ANO6Q4KMQ2 910 aa21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 ANKRD40Q6AI12 368 aa21.56■■□□□ 1.04
SCAMP3-209ENST00000497470 FILIP1Q7Z7B0 1213 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms