RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 ENC1O14682 589 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 IFIT3O14879 490 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 ZBTB5O15062 677 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 NKRFO15226 690 aaKnown RBP eCLIP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 PQBP1O60828 265 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SLU7O95391 586 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 B3GALT4O96024 378 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 COL8A1P27658 744 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 CDC25BP30305 580 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SSR1P43307 286 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 LIG3P49916 1009 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 HSD17B4P51659 736 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 MRPL12P52815 198 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 TRAF1Q13077 416 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 DHX8Q14562 1220 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SART3Q15020 963 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SF3A1Q15459 793 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 ZRSR1Q15695 479 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 ZSCAN26Q16670 478 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 ZNF423Q2M1K9 1284 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SLC35G1Q2M3R5 365 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 USH1GQ495M9 461 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 CT47A1Q5JQC4 288 aaPredicted RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 TMEM63BQ5T3F8 832 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 MCTP2Q6DN12 878 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 FAM109BQ6ICB4 259 aaPredicted RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 CCDC62Q6P9F0 684 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 CXCL17Q6UXB2 119 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SYT10Q6XYQ8 523 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 KRBA2Q6ZNG9 492 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 FILIP1Q7Z7B0 1213 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 FBXO16Q8IX29 292 aaPredicted RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 FAM126BQ8IXS8 530 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 C17orf53Q8N3J3 647 aaPredicted RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 DTWD1Q8N5C7 304 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 FBXO18Q8NFZ0 1043 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 NSUN6Q8TEA1 469 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SREK1Q8WXA9 508 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 BADQ92934 168 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 INTS4Q96HW7 963 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 IWS1Q96ST2 819 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 AMNQ9BXJ7 453 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 WDR11Q9BZH6 1224 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 AP5M1Q9H0R1 490 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 CXorf56Q9H5V9 222 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 MAP3K20Q9NYL2 800 aaKnown RBP7.39□□□□□ -1.23
HOXA9-206ENST00000497089 COL20A1Q9P218 1284 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 SCN10AQ9Y5Y9 1956 aa7.39□□□□□ -1.23
HOXA9-206ENST00000497089 BAZ2BQ9UIF8 2168 aaKnown RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 A0A0A0MRY4 1105 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 ERICH2A1L162 156 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 SLC27A2O14975 620 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 DYNC1LI2O43237 492 aaPredicted RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 CYTH3O43739 400 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 ZEB2O60315 1214 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 PPP1R11O60927 126 aaPredicted RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 TIMP1P01033 207 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 CD4P01730 458 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 ESRRAP11474 423 aaPredicted RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 RAG1P15918 1043 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 H2AFXP16104 143 aaPredicted RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 EPHA1P21709 976 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 SMARCA1P28370 1054 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 GSCP56915 257 aaPredicted RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 BEX3Q00994 111 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 KCNMA1Q12791 1236 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 WTAPQ15007 396 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 SHHQ15465 462 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 TPD52L1Q16890 204 aaPredicted RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 FBXO38Q6PIJ6 1188 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 LEKR1Q6ZMV7 388 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 NOL8Q76FK4 1167 aaKnown RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 EEPD1Q7L9B9 569 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 ALYREFQ86V81 257 aaKnown RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 EXOC8Q8IYI6 725 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 C10orf67Q8IYJ2 551 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 TBC1D5Q92609 795 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 EXOC4Q96A65 974 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 TMEM87BQ96K49 555 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 DRC1Q96MC2 740 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 SPON2Q9BUD6 331 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 EMILIN2Q9BXX0 1053 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 KCNF1Q9H3M0 494 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 PRDM5Q9NQX1 630 aaPredicted RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 RRP15Q9Y3B9 282 aaKnown RBP7.38□□□□□ -1.23
HOXA9-206ENST00000497089 GRIN2DO15399 1336 aa7.38□□□□□ -1.23
HOXA9-206ENST00000497089 LINC01387J3KSC0 135 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 KPNA6O60684 536 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 DDAH1O94760 285 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 CPP00450 1065 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 NME2P22392 152 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 PTGS1P23219 599 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 EIF4A3P38919 411 aaKnown RBP7.37□□□□□ -1.23
HOXA9-206ENST00000497089 LIFRP42702 1097 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 GSK3AP49840 483 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 CPT1AP50416 773 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 RPS26P62854 115 aaKnown RBP7.37□□□□□ -1.23
HOXA9-206ENST00000497089 PURAQ00577 322 aaKnown RBP7.37□□□□□ -1.23
HOXA9-206ENST00000497089 ITGA7Q13683 1181 aa7.37□□□□□ -1.23
HOXA9-206ENST00000497089 LRRC14Q15048 493 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms