RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 GSTA4O15217 222 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 P4HA2O15460 535 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 PHGDHO43175 533 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 DOK2O60496 412 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 DKC1O60832 514 aaKnown RBP eCLIP2.2□□□□□ -2.06
UBR4-217ENST00000497018 TADA3O75528 432 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SOAT2O75908 522 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FAM155BO75949 473 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 URI1O94763 535 aaPredicted RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 PRAMEF1O95521 474 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 MLYCDO95822 493 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 CD3EP07766 207 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 ITGA5P08648 1049 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 MTHFD1P11586 935 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 MTHFD2P13995 350 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 NPR1P16066 1061 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 IL11P20809 199 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FGFR2P21802 821 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SCP2P22307 547 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 EEF1GP26641 437 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 CDC25BP30305 580 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 MAP2K3P46734 347 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FNTBP49356 437 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 KIF11P52732 1056 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SLC5A3P53794 718 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SEC24CP53992 1094 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 PCBP4P57723 403 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 BPIFB3P59826 476 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 VAMP2P63027 116 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 NKX6-1P78426 367 aaPredicted RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 ST5P78524 1137 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 POU4F1Q01851 419 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 TRIM25Q14258 630 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 ERV3-1Q14264 604 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SPARCL1Q14515 664 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 LAPTM4AQ15012 233 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SUZ12Q15022 739 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 SURF1Q15526 300 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 ZNF174Q15697 407 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 GPR19Q15760 415 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 PKN2Q16513 984 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 TAF12Q16514 161 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FIGNQ5HY92 759 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 RTP2Q5QGT7 225 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 CATSPEREQ5SY80 951 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 LMBRD2Q68DH5 695 aaPredicted RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 CYP4F22Q6NT55 531 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 RPUSD3Q6P087 351 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 C20orf204Q6ZNR8 217 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SV2AQ7L0J3 742 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 KRT74Q7RTS7 529 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 WAPLQ7Z5K2 1190 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 DAAM2Q86T65 1068 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 MOGAT3Q86VF5 341 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 ZZZ3Q8IYH5 903 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 CRIPAKQ8N1N5 446 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 IL22RA1Q8N6P7 574 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 C7orf31Q8N865 590 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 ATG16L2Q8NAA4 619 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FANCBQ8NB91 859 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 GALNT11Q8NCW6 608 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 CYP2W1Q8TAV3 490 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FAM71BQ8TC56 605 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 XAGE3Q8WTP9 111 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 AUTS2Q8WXX7 1259 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 RFFLQ8WZ73 363 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 RTF1Q92541 710 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 ERCC4Q92889 916 aaPredicted RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 RILPL2Q969X0 211 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 GTPBP3Q969Y2 492 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 RGMAQ96B86 450 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SH3KBP1Q96B97 665 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 EAF2Q96CJ1 260 aaPredicted RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 RAX2Q96IS3 184 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 C7orf26Q96N11 449 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FCRL3Q96P31 734 aaPredicted RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 SLC12A9Q9BXP2 914 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 HDAC8Q9BY41 377 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 KIAA1683Q9H0B3 1180 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 WNT8AQ9H1J5 351 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 ADAM7Q9H2U9 754 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 KCTD10Q9H3F6 313 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 GHITMQ9H3K2 345 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 ATXN3LQ9H3M9 355 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 PRDM13Q9H4Q3 707 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 C14orf93Q9H972 538 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 JMJD4Q9H9V9 463 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 PNPLA8Q9NP80 782 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 ACSS2Q9NR19 701 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 OLA1Q9NTK5 396 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 GJB4Q9NTQ9 266 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 TMEM160Q9NX00 188 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 STK32BQ9NY57 414 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 KCNK4Q9NYG8 393 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 CLEC1BQ9P126 229 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 AASSQ9UDR5 926 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 TBC1D29Q9UFV1 150 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SRP68Q9UHB9 627 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 MSRAQ9UJ68 235 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms