RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 FNDC1Q4ZHG4 1894 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 E9PMD0 336 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 SPTLC2O15270 562 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 TBCAO75347 108 aaKnown RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 FGF18O76093 207 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 FAM13AO94988 1023 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 F13A1P00488 732 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 C1RP00736 705 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 MAPTP10636 758 aaKnown RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 GAP43P17677 238 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 ARF4P18085 180 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 FGFR4P22455 802 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 YARSP54577 528 aaKnown RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 SLC12A3P55017 1021 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 PTPAQ15257 358 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 IL17AQ16552 155 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 TJAP1Q5JTD0 557 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 ZPBP2Q6X784 338 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 STXBP4Q6ZWJ1 553 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 SV2BQ7L1I2 683 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 MAEAQ7L5Y9 396 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 GPR65Q8IYL9 337 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 MICALL1Q8N3F8 863 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 COLGALT1Q8NBJ5 622 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 HELQQ8TDG4 1101 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 ASAP3Q8TDY4 903 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 MICAL1Q8TDZ2 1067 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 GDPD5Q8WTR4 605 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 MRPS27Q92552 414 aaKnown RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 RAD54LQ92698 747 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 PABPC5Q96DU9 382 aaKnown RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 ZNF668Q96K58 619 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 MMTAG2Q9BU76 263 aaKnown RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 CCDC94Q9BW85 323 aaPredicted RBP8.36□□□□□ -1.07
CDHR3-214ENST00000496633 MINDY3Q9H8M7 445 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 TLR9Q9NR96 1032 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 IPPQ9Y573 584 aa8.36□□□□□ -1.07
CDHR3-214ENST00000496633 PP2D1A8MPX8 630 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CUTAO60888 179 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 HIP1RO75146 1068 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CSDE1O75534 798 aaKnown RBP8.35□□□□□ -1.07
CDHR3-214ENST00000496633 OFD1O75665 1012 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 TOM1L1O75674 476 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 FGFR1P11362 822 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 IBSPP21815 317 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-214ENST00000496633 PAX3P23760 479 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CDC25AP30304 524 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 STAT6P42226 847 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 NPTX2P47972 431 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 NUBP1P53384 320 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 KRT85P78386 507 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 NUCB2P80303 420 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CREMQ03060 361 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 ELAVL2Q12926 359 aaKnown RBP8.35□□□□□ -1.07
CDHR3-214ENST00000496633 GRIK3Q13003 919 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 ECM1Q16610 540 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 AMHR2Q16671 573 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CLLU1OSQ5K130 101 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 ATF7IP2Q5U623 682 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 PDXDC1Q6P996 788 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 PPFIBP1Q86W92 1011 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 GPBP1Q86WP2 473 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 IQUBQ8NA54 791 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 LINC00301Q8NCQ3 95 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 SPPL3Q8TCT6 385 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 POF1BQ8WVV4 589 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 PPM1EQ8WY54 764 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 HVCN1Q96D96 273 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 UROC1Q96N76 676 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 PNMA5Q96PV4 448 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 ASB2Q96Q27 587 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 TCHPQ9BT92 498 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 COLEC11Q9BWP8 271 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 SCAND2PQ9GZW5 306 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CWH43Q9H720 699 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 GPRC5CQ9NQ84 441 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 SLC38A7Q9NVC3 462 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 TBC1D13Q9NVG8 400 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 ARHGAP28Q9P2N2 729 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 USP25Q9UHP3 1055 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 FBXO2Q9UK22 296 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-214ENST00000496633 EXOC7Q9UPT5 735 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 TNFSF13BQ9Y275 285 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 FAN1Q9Y2M0 1017 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 CLIC4Q9Y696 253 aa8.35□□□□□ -1.07
CDHR3-214ENST00000496633 COL4A4P53420 1690 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ARL5CA6NH57 179 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 EPOPA6NHQ4 379 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 RFXAPO00287 272 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 GRM6O15303 877 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 CLDN3O15551 220 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 XPOTO43592 962 aaKnown RBP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ZC3H11AO75152 810 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 BRD1O95696 1058 aa8.34□□□□□ -1.07
CDHR3-214ENST00000496633 ITGB1P05556 798 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms