RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 GOLGA5Q8TBA6 731 aa23.83■■□□□ 1.41
C9orf3-222ENST00000496567 DHTKD1Q96HY7 919 aaPredicted RBP23.83■■□□□ 1.41
C9orf3-222ENST00000496567 ANO10Q9NW15 660 aa23.83■■□□□ 1.41
C9orf3-222ENST00000496567 CGNQ9P2M7 1197 aaKnown RBP23.83■■□□□ 1.41
C9orf3-222ENST00000496567 USP20Q9Y2K6 914 aa23.83■■□□□ 1.41
C9orf3-222ENST00000496567 SYCE3A1L190 88 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 IKBKEQ14164 716 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 DSC3Q14574 896 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 STX1AQ16623 288 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 TWF2Q6IBS0 349 aaKnown RBP23.82■■□□□ 1.4
C9orf3-222ENST00000496567 SLFN12LQ6IEE8 588 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 SLC27A1Q6PCB7 646 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 TCHPQ9BT92 498 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 KCTD10Q9H3F6 313 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 PDZD7Q9H5P4 517 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 TYW1Q9NV66 732 aaKnown RBP23.82■■□□□ 1.4
C9orf3-222ENST00000496567 ZMYM2Q9UBW7 1377 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 PPP1R3GB7ZBB8 358 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 PDXKO00764 312 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 CLDN3O15551 220 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 CCDC192P0DO97 292 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 ACTN1P12814 892 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 MPZL3Q6UWV2 235 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 VWCEQ96DN2 955 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 ADAM2Q99965 735 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 PTPRHQ9HD43 1115 aa23.82■■□□□ 1.4
C9orf3-222ENST00000496567 EFCAB14O75071 495 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 CD44P16070 742 aaKnown RBP23.81■■□□□ 1.4
C9orf3-222ENST00000496567 PROZP22891 400 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 MATR3P43243 847 aaKnown RBP eCLIP23.81■■□□□ 1.4
C9orf3-222ENST00000496567 TYRO3Q06418 890 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 DPCR1Q3MIW9 517 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 ZNF568Q3ZCX4 644 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 CT47A1Q5JQC4 288 aaPredicted RBP23.81■■□□□ 1.4
C9orf3-222ENST00000496567 TRAIPQ9BWF2 469 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 TSPYL2Q9H2G4 693 aaPredicted RBP23.81■■□□□ 1.4
C9orf3-222ENST00000496567 C1orf112Q9NSG2 853 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 ANKFY1Q9P2R3 1169 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 STYXL1Q9Y6J8 313 aa23.81■■□□□ 1.4
C9orf3-222ENST00000496567 TET1Q8NFU7 2136 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 ABHD14A-ACY1A0A1B0GW23 586 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 ANKRD63C9JTQ0 380 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 TGFB1I1O43294 461 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 CALUO43852 315 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-222ENST00000496567 MGEA5O60502 916 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 ACRP10323 421 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 DCAF4L1Q3SXM0 396 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 CENPPQ6IPU0 288 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 KLHL10Q6JEL2 608 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 SLC39A4Q6P5W5 647 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 PSRC1Q6PGN9 363 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-222ENST00000496567 CDR2LQ86X02 465 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-222ENST00000496567 TRIM6Q9C030 488 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-222ENST00000496567 IKZF4Q9H2S9 585 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 RGS18Q9NS28 235 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 TRAF3IP3Q9Y228 551 aa23.8■■□□□ 1.4
C9orf3-222ENST00000496567 FGBP02675 491 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 SKIP12755 728 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 GARTP22102 1010 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 CCNE1P24864 410 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 RAB27AP51159 221 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 MCL1Q07820 350 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 NOLC1Q14978 699 aaKnown RBP eCLIP23.79■■□□□ 1.4
C9orf3-222ENST00000496567 EEF1DP3Q658K8 133 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 POMGNT1Q8WZA1 660 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 P2RX5Q93086 422 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 ZBTB45Q96K62 511 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-222ENST00000496567 TSG101Q99816 390 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 AGPAT3Q9NRZ7 376 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 PCDH10Q9P2E7 1040 aa23.79■■□□□ 1.4
C9orf3-222ENST00000496567 BICDL2A1A5D9 508 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 BAIAP3O94812 1187 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 MCF2P10911 925 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 PAK1Q13153 545 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 ARMCX5Q6P1M9 558 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 SLC24A5Q71RS6 500 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 NELFBQ8WX92 580 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 GZF1Q9H116 711 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-222ENST00000496567 SEMA6BQ9H3T3 888 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 A0A0B4J269 797 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 TISP43B9A030 160 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 ENPP3O14638 875 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 ABLIM1O14639 778 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 KIAA0391O15091 583 aaKnown RBP23.78■■□□□ 1.4
C9orf3-222ENST00000496567 NPTXRO95502 500 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 ADSSP30520 456 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 LRRC63Q05C16 580 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 TCTN1Q2MV58 587 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 UBXN11Q5T124 520 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 ZNF365Q70YC5 407 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 C16orf59Q7L2K0 433 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 ZBTB33Q86T24 672 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 RTN4RL1Q86UN2 441 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-222ENST00000496567 C12orf56Q8IXR9 622 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 MSTO1Q9BUK6 570 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 EIF2AQ9BY44 585 aaKnown RBP23.78■■□□□ 1.4
C9orf3-222ENST00000496567 CDT1Q9H211 546 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 FAM105AQ9NUU6 356 aa23.78■■□□□ 1.4
C9orf3-222ENST00000496567 RNF216Q9NWF9 866 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-222ENST00000496567 CTNND2Q9UQB3 1225 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms