RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 HOXA11P31270 313 aaPredicted RBP20.1■□□□□ 0.81
TSSC4-210ENST00000496468 PPP1R2P41236 205 aa20.1■□□□□ 0.81
TSSC4-210ENST00000496468 IKBKEQ14164 716 aa20.1■□□□□ 0.81
TSSC4-210ENST00000496468 DSC3Q14574 896 aa20.1■□□□□ 0.81
TSSC4-210ENST00000496468 COBLL1Q53SF7 1204 aa20.1■□□□□ 0.81
TSSC4-210ENST00000496468 SLC27A1Q6PCB7 646 aa20.1■□□□□ 0.81
TSSC4-210ENST00000496468 APBB1IPQ7Z5R6 666 aaPredicted RBP20.1■□□□□ 0.81
TSSC4-210ENST00000496468 GUF1Q8N442 669 aaKnown RBP20.1■□□□□ 0.81
TSSC4-210ENST00000496468 ADAM2Q99965 735 aa20.1■□□□□ 0.81
TSSC4-210ENST00000496468 TRIM6Q9C030 488 aaPredicted RBP20.1■□□□□ 0.81
TSSC4-210ENST00000496468 TSPYL2Q9H2G4 693 aaPredicted RBP20.1■□□□□ 0.81
TSSC4-210ENST00000496468 TNFSF13BQ9Y275 285 aa20.1■□□□□ 0.81
TSSC4-210ENST00000496468 A0A1B0GUA9 196 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 EFCAB14O75071 495 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 BMP6P22004 513 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 PRCPP42785 496 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 MATR3P43243 847 aaKnown RBP eCLIP20.09■□□□□ 0.81
TSSC4-210ENST00000496468 EPHB4P54760 987 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 NOLC1Q14978 699 aaKnown RBP eCLIP20.09■□□□□ 0.81
TSSC4-210ENST00000496468 KNOP1Q1ED39 458 aaKnown RBP20.09■□□□□ 0.81
TSSC4-210ENST00000496468 DCAF4L1Q3SXM0 396 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 SASS6Q6UVJ0 657 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 MPZL3Q6UWV2 235 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 HS2ST1Q7LGA3 356 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 CDR2LQ86X02 465 aaPredicted RBP20.09■□□□□ 0.81
TSSC4-210ENST00000496468 GBP3Q9H0R5 595 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 C1orf112Q9NSG2 853 aa20.09■□□□□ 0.81
TSSC4-210ENST00000496468 ABHD14A-ACY1A0A1B0GW23 586 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 PSMA7O14818 248 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 LETM1O95202 739 aaPredicted RBP20.08■□□□□ 0.81
TSSC4-210ENST00000496468 NPTXRO95502 500 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 HARSP12081 509 aaKnown RBP20.08■□□□□ 0.81
TSSC4-210ENST00000496468 PROZP22891 400 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 HOXD13P35453 343 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 RAB27AP51159 221 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 NLRP12P59046 1061 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 EEF1DP3Q658K8 133 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 SLC39A4Q6P5W5 647 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 ZNF365Q70YC5 407 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.81
TSSC4-210ENST00000496468 IKZF4Q9H2S9 585 aa20.08■□□□□ 0.81
TSSC4-210ENST00000496468 ZBBXA8MT70 800 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 TISP43B9A030 160 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 FGBP02675 491 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 IBSPP21815 317 aaPredicted RBP20.07■□□□□ 0.8
TSSC4-210ENST00000496468 STX1AQ16623 288 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 DPCR1Q3MIW9 517 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 TMEM240Q5SV17 173 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 KLHL10Q6JEL2 608 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 ARMCX5Q6P1M9 558 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 C16orf59Q7L2K0 433 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 OTOP2Q7RTS6 562 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 ZBTB33Q86T24 672 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 ADSSL1Q8N142 457 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 GOLGA5Q8TBA6 731 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 TCHPQ9BT92 498 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 EIF2AQ9BY44 585 aaKnown RBP20.07■□□□□ 0.8
TSSC4-210ENST00000496468 CDT1Q9H211 546 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 MTIF3Q9H2K0 278 aaKnown RBP20.07■□□□□ 0.8
TSSC4-210ENST00000496468 RGS18Q9NS28 235 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 FAM105AQ9NUU6 356 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 TYW1Q9NV66 732 aaKnown RBP20.07■□□□□ 0.8
TSSC4-210ENST00000496468 DACH1Q9UI36 760 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 CTNND2Q9UQB3 1225 aa20.07■□□□□ 0.8
TSSC4-210ENST00000496468 SYCE3A1L190 88 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 ANKRD63C9JTQ0 380 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 ABLIM1O14639 778 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 CLDN3O15551 220 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 MCF2P10911 925 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 SKIP12755 728 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 KCNJ6P48051 423 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 WDR5P61964 334 aaKnown RBP20.06■□□□□ 0.8
TSSC4-210ENST00000496468 MCL1Q07820 350 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 ZSCAN23Q3MJ62 389 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 UBXN11Q5T124 520 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 SLFN12LQ6IEE8 588 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 SLC24A5Q71RS6 500 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 MLKLQ8NB16 471 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 POMGNT1Q8WZA1 660 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 MSTO1Q9BUK6 570 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 TRAIPQ9BWF2 469 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 KCTD10Q9H3F6 313 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 PTPRHQ9HD43 1115 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 AGPAT3Q9NRZ7 376 aa20.06■□□□□ 0.8
TSSC4-210ENST00000496468 CGNQ9P2M7 1197 aaKnown RBP20.06■□□□□ 0.8
TSSC4-210ENST00000496468 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.05■□□□□ 0.8
TSSC4-210ENST00000496468 TGFB1I1O43294 461 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 CALUO43852 315 aaPredicted RBP20.05■□□□□ 0.8
TSSC4-210ENST00000496468 CD44P16070 742 aaKnown RBP20.05■□□□□ 0.8
TSSC4-210ENST00000496468 GARTP22102 1010 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 SNRPFP62306 86 aaKnown RBP20.05■□□□□ 0.8
TSSC4-210ENST00000496468 TYRO3Q06418 890 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 PAK1Q13153 545 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 HACE1Q8IYU2 909 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 HERVK_113Q902F9 699 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 ZBTB45Q96K62 511 aaPredicted RBP20.05■□□□□ 0.8
TSSC4-210ENST00000496468 TSG101Q99816 390 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 UBE2OQ9C0C9 1292 aaKnown RBP20.05■□□□□ 0.8
TSSC4-210ENST00000496468 NXF3Q9H4D5 531 aaKnown RBP20.05■□□□□ 0.8
TSSC4-210ENST00000496468 ANO10Q9NW15 660 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms