RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 LINC01565O15544 149 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 STX6O43752 255 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 ITGA4P13612 1032 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 KCNA5P22460 613 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 PPM1AP35813 382 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 LONP1P36776 959 aaKnown RBP13.61□□□□□ -0.23
TRIM59-207ENST00000496222 NPTX2P47972 431 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 SLC11A1P49279 550 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 KCNC3Q14003 757 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 NT5DC1Q5TFE4 455 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 USP49Q70CQ1 688 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 CABP7Q86V35 215 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 ADAMTS19Q8TE59 1207 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 NECAB3Q96P71 396 aaPredicted RBP13.61□□□□□ -0.23
TRIM59-207ENST00000496222 PLIN2Q99541 437 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 NTPCRQ9BSD7 190 aaKnown RBP13.61□□□□□ -0.23
TRIM59-207ENST00000496222 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 NT5C3AQ9H0P0 336 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 ARHGAP28Q9P2N2 729 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 FBXO2Q9UK22 296 aaPredicted RBP13.61□□□□□ -0.23
TRIM59-207ENST00000496222 INPP5FQ9Y2H2 1132 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 MORC2Q9Y6X9 1032 aaPredicted RBP13.61□□□□□ -0.23
TRIM59-207ENST00000496222 H3BQ06 376 aaPredicted RBP13.6□□□□□ -0.23
TRIM59-207ENST00000496222 NCK2O43639 380 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 ZC3H11AO75152 810 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRIM59-207ENST00000496222 TBX10O75333 385 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 NPTXRO95502 500 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 GLP2RO95838 553 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 EFEMP2O95967 443 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 PRKCBP05771 671 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 ALDH7A1P49419 539 aaKnown RBP13.6□□□□□ -0.23
TRIM59-207ENST00000496222 DSC1Q08554 894 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 NCBP1Q09161 790 aaKnown RBP13.6□□□□□ -0.23
TRIM59-207ENST00000496222 PPP2R5AQ15172 486 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 ZRSR1Q15695 479 aaKnown RBP13.6□□□□□ -0.23
TRIM59-207ENST00000496222 MAPK6Q16659 721 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 EEF1DP3Q658K8 133 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 PDE12Q6L8Q7 609 aaKnown RBP13.6□□□□□ -0.23
TRIM59-207ENST00000496222 EFHBQ8N7U6 833 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 VN1R2Q8NFZ6 395 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 IGSF21Q96ID5 467 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 MSLNLQ96KJ4 702 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 IFT74Q96LB3 600 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 USP28Q96RU2 1077 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 GAD1Q99259 594 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 TIPINQ9BVW5 301 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 CCSER1Q9C0I3 900 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 CLDND1Q9NY35 253 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 CLEC1BQ9P126 229 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 GIT1Q9Y2X7 761 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 MYH15Q9Y2K3 1946 aa13.6□□□□□ -0.23
TRIM59-207ENST00000496222 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 TDRD15B5MCY1 1934 aaKnown RBP13.59□□□□□ -0.23
TRIM59-207ENST00000496222 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 HIDE1A8MVS5 230 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 POMCP01189 267 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 AKAP5P24588 427 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
TRIM59-207ENST00000496222 MLH1P40692 756 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 NRIP1P48552 1158 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 EFNA5P52803 228 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 PEX3P56589 373 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 RBM10P98175 930 aaKnown RBP13.59□□□□□ -0.23
TRIM59-207ENST00000496222 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
TRIM59-207ENST00000496222 KARSQ15046 597 aaKnown RBP13.59□□□□□ -0.23
TRIM59-207ENST00000496222 DUSP6Q16828 381 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 COLGALT2Q8IYK4 626 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 URGCPQ8TCY9 931 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 EPSTI1Q96J88 318 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 CXCL16Q9H2A7 254 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
TRIM59-207ENST00000496222 IGFLR1Q9H665 355 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 PTPRHQ9HD43 1115 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 SRPRBQ9Y5M8 271 aaKnown RBP13.59□□□□□ -0.23
TRIM59-207ENST00000496222 MYH11P35749 1972 aa13.59□□□□□ -0.23
TRIM59-207ENST00000496222 NPHP3-ACAD11A0A0J9YXS1 232 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 ABLIM1O14639 778 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 N4BP3O15049 544 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 PER2O15055 1255 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 PLCG1P19174 1290 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 UBA7P41226 1012 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 SCNN1GP51170 649 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 KRT17Q04695 432 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 RAD51AP2Q09MP3 1159 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 SLC39A14Q15043 492 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 PLPP4Q5VZY2 271 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.24
TRIM59-207ENST00000496222 RBM23Q86U06 439 aaKnown RBP13.58□□□□□ -0.24
TRIM59-207ENST00000496222 MRPL43Q8N983 215 aaKnown RBP13.58□□□□□ -0.24
TRIM59-207ENST00000496222 TMEM161BQ8NDZ6 487 aa13.58□□□□□ -0.24
TRIM59-207ENST00000496222 SPIRE2Q8WWL2 714 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms