RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LY6G5CQ5SRR4 150 aa5.09□□□□□ -1.59
CLK1-214ENST00000496205 CMIPQ8IY22 773 aa5.09□□□□□ -1.59
CLK1-214ENST00000496205 NKD2Q969F2 451 aaPredicted RBP5.09□□□□□ -1.59
CLK1-214ENST00000496205 GFM2Q969S9 779 aaKnown RBP5.09□□□□□ -1.59
CLK1-214ENST00000496205 METTL14Q9HCE5 456 aaKnown RBP5.09□□□□□ -1.59
CLK1-214ENST00000496205 TRHDEQ9UKU6 1024 aa5.09□□□□□ -1.59
CLK1-214ENST00000496205 EID1Q9Y6B2 187 aa5.09□□□□□ -1.59
CLK1-214ENST00000496205 GOLGA6L6A8MZA4 724 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 SLC9A1P19634 815 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 CLK3P49761 638 aaKnown RBP5.08□□□□□ -1.6
CLK1-214ENST00000496205 IRF9Q00978 393 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 MCL1Q07820 350 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 ITKQ08881 620 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 ATP13A4Q4VNC1 1196 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 ESRP1Q6NXG1 681 aaKnown RBP5.08□□□□□ -1.6
CLK1-214ENST00000496205 OLFML1Q6UWY5 402 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 CXorf67Q86X51 503 aaPredicted RBP5.08□□□□□ -1.6
CLK1-214ENST00000496205 ADGRG3Q86Y34 549 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 SYNE4Q8N205 404 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 CLRN3Q8NCR9 226 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 MDGA1Q8NFP4 955 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 TSR2Q969E8 191 aaKnown RBP5.08□□□□□ -1.6
CLK1-214ENST00000496205 ELF4Q99607 663 aaPredicted RBP5.08□□□□□ -1.6
CLK1-214ENST00000496205 BOCQ9BWV1 1114 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 ADARB2Q9NS39 739 aaKnown RBP5.08□□□□□ -1.6
CLK1-214ENST00000496205 CHPF2Q9P2E5 772 aa5.08□□□□□ -1.6
CLK1-214ENST00000496205 TNKSO95271 1327 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 SLC12A8A0AV02 714 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 FZD9O00144 591 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 CPEP16870 476 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 PTX3P26022 381 aaPredicted RBP5.07□□□□□ -1.6
CLK1-214ENST00000496205 IARSP41252 1262 aaKnown RBP5.07□□□□□ -1.6
CLK1-214ENST00000496205 RGS3P49796 1198 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 KPNA1P52294 538 aaPredicted RBP5.07□□□□□ -1.6
CLK1-214ENST00000496205 ABCB5Q2M3G0 1257 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 INAVAQ3KP66 663 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 GAGE13Q4V321 117 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 HECTD2Q5U5R9 776 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 SYCE2Q6PIF2 218 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 LRRC55Q6ZSA7 311 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 CLEC14AQ86T13 490 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 PLA2G15Q8NCC3 412 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 BEND2Q8NDZ0 799 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 ZNF512Q96ME7 567 aaPredicted RBP5.07□□□□□ -1.6
CLK1-214ENST00000496205 PUS7LQ9H0K6 701 aaKnown RBP5.07□□□□□ -1.6
CLK1-214ENST00000496205 TOR3AQ9H497 397 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 PRDM13Q9H4Q3 707 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 ZKSCAN5Q9Y2L8 839 aa5.07□□□□□ -1.6
CLK1-214ENST00000496205 KIAA0355O15063 1070 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 MFAP3LO75121 409 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 STC2O76061 302 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 TOX4O94842 621 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 SYDE2Q5VT97 1194 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 NAIF1Q69YI7 327 aaPredicted RBP5.06□□□□□ -1.6
CLK1-214ENST00000496205 KCNV1Q6PIU1 500 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 HDGFL2Q7Z4V5 671 aaPredicted RBP5.06□□□□□ -1.6
CLK1-214ENST00000496205 FMNL3Q8IVF7 1028 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 EFHBQ8N7U6 833 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 KIAA1958Q8N8K9 716 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 OR5AN1Q8NGI8 311 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 SLC5A5Q92911 643 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 FOXB1Q99853 325 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 RTFDC1Q9BY42 306 aaPredicted RBP5.06□□□□□ -1.6
CLK1-214ENST00000496205 ZNF768Q9H5H4 540 aaKnown RBP5.06□□□□□ -1.6
CLK1-214ENST00000496205 ZMAT4Q9H898 229 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 RCAN3Q9UKA8 241 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 SORCS3Q9UPU3 1222 aa5.06□□□□□ -1.6
CLK1-214ENST00000496205 SHTN1A0MZ66 631 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 K7ESF4 209 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 B3GALT2O43825 422 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 VSIG10L2P0DP72 767 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 RAB27AP51159 221 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 NEK2P51955 445 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 KIF11P52732 1056 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 KRTAP10-9P60411 292 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 SART3Q15020 963 aaKnown RBP5.05□□□□□ -1.6
CLK1-214ENST00000496205 TERF2Q15554 542 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 DDB1Q16531 1140 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 BROXQ5VW32 411 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 IQSEC1Q6DN90 963 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 MFSD5Q6N075 450 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 CPT1CQ8TCG5 803 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 TOPORSQ9NS56 1045 aaPredicted RBP5.05□□□□□ -1.6
CLK1-214ENST00000496205 SPO11Q9Y5K1 396 aa5.05□□□□□ -1.6
CLK1-214ENST00000496205 H7C1D1 291 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 AKAP10O43572 662 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 MT-CO1P00395 513 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 APPP05067 770 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 HK1P19367 917 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 SLC6A3Q01959 620 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 PDCD1Q15116 288 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 NFE2Q16621 373 aaPredicted RBP5.04□□□□□ -1.6
CLK1-214ENST00000496205 DGKDQ16760 1214 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 ARHGAP44Q17R89 818 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 HOOK2Q96ED9 719 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 C14orf119Q9NWQ9 140 aa5.04□□□□□ -1.6
CLK1-214ENST00000496205 CENPVL1A0A0U1RR11 272 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 INO80B-WBP1J3KQ70 363 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 LPXNO60711 386 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 IPO13O94829 963 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms