RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 C11orf57Q6ZUT1 292 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-218ENST00000496197 MYOCDQ8IZQ8 938 aa14.8□□□□□ -0.04
PTPN7-218ENST00000496197 GUF1Q8N442 669 aaKnown RBP14.8□□□□□ -0.04
PTPN7-218ENST00000496197 SYAP1Q96A49 352 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-218ENST00000496197 MRPL4Q9BYD3 311 aaKnown RBP14.8□□□□□ -0.04
PTPN7-218ENST00000496197 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-218ENST00000496197 IL23AQ9NPF7 189 aa14.8□□□□□ -0.04
PTPN7-218ENST00000496197 COL4A6Q14031 1691 aa14.8□□□□□ -0.04
PTPN7-218ENST00000496197 UBE4BO95155 1302 aa14.8□□□□□ -0.04
PTPN7-218ENST00000496197 CITO14578 2027 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 H0YGN5 161 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 HNRNPDLO14979 420 aaKnown RBP14.79□□□□□ -0.04
PTPN7-218ENST00000496197 ZCWPW2Q504Y3 356 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 CNKSR3Q6P9H4 555 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 CEP120Q8N960 986 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 SEPT8Q92599 483 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 BICD1Q96G01 975 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 ADAM2Q99965 735 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.79□□□□□ -0.04
PTPN7-218ENST00000496197 CBWD1Q9BRT8 395 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 CDT1Q9H211 546 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 ANKFY1Q9P2R3 1169 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 TNFSF13BQ9Y275 285 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 FNDC1Q4ZHG4 1894 aaPredicted RBP14.79□□□□□ -0.04
PTPN7-218ENST00000496197 TTC3P53804 2025 aa14.79□□□□□ -0.04
PTPN7-218ENST00000496197 MEIS3P2A8K0S8 358 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 CLIC2O15247 247 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 FAM189A1O60320 539 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 NPTXRO95502 500 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 LIG4P49917 911 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 TYRO3Q06418 890 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 PPIGQ13427 754 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTPN7-218ENST00000496197 PCBP1Q15365 356 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTPN7-218ENST00000496197 SEZ6Q53EL9 994 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 TMEM240Q5SV17 173 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 ZBTB41Q5SVQ8 909 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 KLHL10Q6JEL2 608 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 NOTUMQ6P988 496 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 ZPBP2Q6X784 338 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTPN7-218ENST00000496197 ZNF365Q70YC5 407 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 OTOP2Q7RTS6 562 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 ZBTB33Q86T24 672 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 TMEM192Q8IY95 271 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 TMEM206Q9H813 350 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 AGPAT3Q9NRZ7 376 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 CTNND2Q9UQB3 1225 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 HES2Q9Y543 173 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 NR2E3Q9Y5X4 410 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 STYXL1Q9Y6J8 313 aa14.78□□□□□ -0.04
PTPN7-218ENST00000496197 ENPP3O14638 875 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 MEFVO15553 781 aaPredicted RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 TOM1L1O75674 476 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 HARSP12081 509 aaKnown RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 ATF7P17544 494 aaPredicted RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 SCP2P22307 547 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 AXLP30530 894 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 STX17P56962 302 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 MLLT1Q03111 559 aaPredicted RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 ZNF568Q3ZCX4 644 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 TWF2Q6IBS0 349 aaKnown RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 CENPPQ6IPU0 288 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 SLC27A1Q6PCB7 646 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 MPZL3Q6UWV2 235 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 STXBP4Q6ZWJ1 553 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 TMCO2Q7Z6W1 182 aaPredicted RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 SYCP3Q8IZU3 236 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 SMG8Q8ND04 991 aaKnown RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 APBB2Q92870 758 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 GBP3Q9H0R5 595 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 CXCL16Q9H2A7 254 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 NXF3Q9H4D5 531 aaKnown RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 PCIF1Q9H4Z3 704 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 RGS18Q9NS28 235 aa14.77□□□□□ -0.04
PTPN7-218ENST00000496197 CXXC1Q9P0U4 656 aaPredicted RBP14.77□□□□□ -0.04
PTPN7-218ENST00000496197 TDRD15B5MCY1 1934 aaKnown RBP14.77□□□□□ -0.05
PTPN7-218ENST00000496197 A0A0B4J269 797 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 C9IYK1 514 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 N4BP3O15049 544 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 IBSPP21815 317 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-218ENST00000496197 ABCD1P33897 745 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 TNFSF9P41273 254 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 DEFB103AP81534 67 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 MCL1Q07820 350 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 TMEM132AQ24JP5 1023 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 C9orf50Q5SZB4 431 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 ANKRD40Q6AI12 368 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 SASS6Q6UVJ0 657 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 NELFBQ8WX92 580 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 SAAL1Q96ER3 474 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 EEF2KMTQ96G04 330 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 DUSP9Q99956 384 aaKnown RBP14.76□□□□□ -0.05
PTPN7-218ENST00000496197 DNAJC25Q9H1X3 360 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 CHST12Q9NRB3 414 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 FAM105AQ9NUU6 356 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 TYW1Q9NV66 732 aaKnown RBP14.76□□□□□ -0.05
PTPN7-218ENST00000496197 EXOC7Q9UPT5 735 aa14.76□□□□□ -0.05
PTPN7-218ENST00000496197 KIAA1671Q9BY89 1806 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms