RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	TFIP11	Q9UBB9	837 aa	Known RBP	13.65	□□□□□ -0.22
MRPL55-233	ENST00000495899	PLAGL2	Q9UPG8	496 aa		13.65	□□□□□ -0.22
MRPL55-233	ENST00000495899	ARID2	Q68CP9	1835 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899		K7ERI5	159 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	SPTLC2	O15270	562 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	OFD1	O75665	1012 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	PLCG1	P19174	1290 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	SCP2	P22307	547 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	MLLT3	P42568	568 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	NPTX2	P47972	431 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	PEX3	P56589	373 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	MAPK7	Q13164	816 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	DMP1	Q13316	513 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	PRPF4B	Q13523	1007 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	KARS	Q15046	597 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	CCDC85B	Q15834	202 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	ARSH	Q5FYA8	562 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	SPOUT1	Q5T280	376 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	LRRC55	Q6ZSA7	311 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	HACE1	Q8IYU2	909 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	HELQ	Q8TDG4	1101 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	SPIRE2	Q8WWL2	714 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	RAD54L	Q92698	747 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	TMEM134	Q9H6X4	195 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	CWH43	Q9H720	699 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	BLOC1S4	Q9NUP1	217 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	STK17A	Q9UEE5	414 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	CFAP45	Q9UL16	551 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	ODF2L	Q9ULJ1	636 aa		13.64	□□□□□ -0.23
MRPL55-233	ENST00000495899	LOXHD1	Q8IVV2	1947 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	CCDC169	A6NNP5	214 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	N4BP3	O15049	544 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	B4GALT5	O43286	388 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	PRKCB	P05771	671 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	ITGA4	P13612	1032 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	PLS3	P13797	630 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	SMTN	P53814	917 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	UBE3A	Q05086	875 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	NOMO2	Q5JPE7	1267 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	AGMO	Q6ZNB7	445 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	USP49	Q70CQ1	688 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	KLHL23	Q8NBE8	558 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	COLGALT1	Q8NBJ5	622 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	SMG8	Q8ND04	991 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	SLC17A8	Q8NDX2	589 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	SPPL3	Q8TCT6	385 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	PPM1E	Q8WY54	764 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	SYMPK	Q92797	1274 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	LPP	Q93052	612 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	CPB2	Q96IY4	423 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	CLIC6	Q96NY7	704 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	TRIM6	Q9C030	488 aa	Predicted RBP	13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	RSAD1	Q9HA92	442 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	POLD4	Q9HCU8	107 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	KMT5A	Q9NQR1	393 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	LARS	Q9P2J5	1176 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899	IPP	Q9Y573	584 aa		13.63	□□□□□ -0.23
MRPL55-233	ENST00000495899		H0YCG3	227 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	GRM6	O15303	877 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	INPPL1	O15357	1258 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	CUTA	O60888	179 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	ITGB1	P05556	798 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	PPM1A	P35813	382 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	ALDH7A1	P49419	539 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	PLCB3	Q01970	1234 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	PKP1	Q13835	747 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	TIGD5	Q53EQ6	642 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	SPECC1	Q5M775	1068 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	RRAGB	Q5VZM2	374 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	KCNT2	Q6UVM3	1135 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	CCDC73	Q6ZRK6	1079 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	GPBP1	Q86WP2	473 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	MICALL1	Q8N3F8	863 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	URGCP	Q8TCY9	931 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	KCNG4	Q8TDN1	519 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	LARP4B	Q92615	738 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	KCNN1	Q92952	543 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	ZNF558	Q96NG5	402 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	ADPGK	Q9BRR6	497 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	EIF2A	Q9BY44	585 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	ALG13	Q9NP73	1137 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	ARHGAP28	Q9P2N2	729 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	LZTS1	Q9Y250	596 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	GIT1	Q9Y2X7	761 aa		13.62	□□□□□ -0.23
MRPL55-233	ENST00000495899	ZMYM2	Q9UBW7	1377 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	MEIS3P2	A8K0S8	358 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	SFI1	A8K8P3	1242 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	FGF18	O76093	207 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	BRD1	O95696	1058 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	ZNF131	P52739	623 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	KRT17	Q04695	432 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	RAD51AP2	Q09MP3	1159 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	MCM6	Q14566	821 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	LONRF3	Q496Y0	759 aa		13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	PDE12	Q6L8Q7	609 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
MRPL55-233	ENST00000495899	THNSL1	Q8IYQ7	743 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms