RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 NDUFS2O75306 463 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 TRIM25Q14258 630 aaKnown RBP7.55□□□□□ -1.2
CCDC39-207ENST00000495817 GIMAP8Q8ND71 665 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-207ENST00000495817 CHST13Q8NET6 341 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 BORCS6Q96GS4 357 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 PTPN18Q99952 460 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 C1QTNF3Q9BXJ4 246 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 OSBPL6Q9BZF3 934 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 NELFAQ9H3P2 528 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 NMRK2Q9NPI5 230 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 DPP7Q9UHL4 492 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 RCAN3Q9UKA8 241 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 SLC30A1Q9Y6M5 507 aa7.55□□□□□ -1.2
CCDC39-207ENST00000495817 MATN2O00339 956 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 CDC14BO60729 498 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 RAD17O75943 681 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 PCDH8O95206 1070 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 MYL1P05976 194 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 ADRB1P08588 477 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 ANTXR2P58335 489 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 ADAM15Q13444 863 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 TAX1BP1Q86VP1 789 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 CDYL2Q8N8U2 506 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC39-207ENST00000495817 TSPEARQ8WU66 669 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 GCDHQ92947 438 aaPredicted RBP7.54□□□□□ -1.2
CCDC39-207ENST00000495817 DPYSL5Q9BPU6 564 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 NOL10Q9BSC4 688 aaKnown RBP7.54□□□□□ -1.2
CCDC39-207ENST00000495817 SLC6A15Q9H2J7 730 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 ARNT2Q9HBZ2 717 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 ANLNQ9NQW6 1124 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 TUBD1Q9UJT1 453 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 PCDHB6Q9Y5E3 794 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 CDY2AQ9Y6F7 541 aa7.54□□□□□ -1.2
CCDC39-207ENST00000495817 SELENOPP49908 381 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 DUSP8Q13202 625 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 GBX1Q14549 363 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 ICAM4Q14773 271 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 MAP9Q49MG5 647 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 HS1BP3Q53T59 392 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 IFIT1BQ5T764 474 aaKnown RBP7.53□□□□□ -1.2
CCDC39-207ENST00000495817 TCTN3Q6NUS6 607 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 CLEC14AQ86T13 490 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 OR14K1Q8NGZ2 314 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 RABGGTAQ92696 567 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 FATE1Q969F0 183 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 SLC2A13Q96QE2 648 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 SLC12A5Q9H2X9 1139 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 C12orf65Q9H3J6 166 aaKnown RBP7.53□□□□□ -1.2
CCDC39-207ENST00000495817 CD248Q9HCU0 757 aa7.53□□□□□ -1.2
CCDC39-207ENST00000495817 ZFR2Q9UPR6 939 aaKnown RBP7.53□□□□□ -1.2
CCDC39-207ENST00000495817 PLIN1O60240 522 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 NRP2O60462 931 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 OFD1O75665 1012 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 FSBPO95073 299 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 POU2F2P09086 479 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 BUD31P41223 144 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-207ENST00000495817 SLC16A1P53985 500 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 ADAM17P78536 824 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 PPARAQ07869 468 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 B3GNT9Q6UX72 402 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 THEMISQ8N1K5 641 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-207ENST00000495817 SLC35G2Q8TBE7 412 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 GAB3Q8WWW8 586 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 DVL3Q92997 716 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-207ENST00000495817 RUNDC1Q96C34 613 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 C8orf49Q96NF6 230 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 GNRHR2Q96P88 292 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 CDK5RAP1Q96SZ6 601 aaKnown RBP7.52□□□□□ -1.21
CCDC39-207ENST00000495817 ACE2Q9BYF1 805 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-207ENST00000495817 C14orf93Q9H972 538 aaKnown RBP7.52□□□□□ -1.21
CCDC39-207ENST00000495817 TCAF1Q9Y4C2 921 aa7.52□□□□□ -1.21
CCDC39-207ENST00000495817 DAPK3O43293 454 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 ZNF623O75123 536 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 WASP42768 502 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 ADCY7P51828 1080 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 KIF23Q02241 960 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-207ENST00000495817 ATAT1Q5SQI0 421 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 SLC4A10Q6U841 1118 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 POLNQ7Z5Q5 900 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 PPP1R14CQ8TAE6 165 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 COA7Q96BR5 231 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 PAWRQ96IZ0 340 aaKnown RBP7.51□□□□□ -1.21
CCDC39-207ENST00000495817 LRGUKQ96M69 825 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 PLA2G12BQ9BX93 195 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 C1orf112Q9NSG2 853 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 DNAI1Q9UI46 699 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 USP18Q9UMW8 372 aa7.51□□□□□ -1.21
CCDC39-207ENST00000495817 MTSS1O43312 755 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 FOXS1O43638 330 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 AP1G1O43747 822 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 XPAP23025 273 aaPredicted RBP7.5□□□□□ -1.21
CCDC39-207ENST00000495817 CDK17Q00537 523 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 PURAQ00577 322 aaKnown RBP7.5□□□□□ -1.21
CCDC39-207ENST00000495817 MALLQ13021 153 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 ARHGAP29Q52LW3 1261 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 UNC5BQ8IZJ1 945 aa7.5□□□□□ -1.21
CCDC39-207ENST00000495817 SHCBP1Q8NEM2 672 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms