RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 ARHGEF35A5YM69 484 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 ARL5CA6NH57 179 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 LRRIQ4A6NIV6 560 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 TTLL13PA6NNM8 815 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 LOC730098B7Z3J9 87 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 LAD1O00515 517 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 NRP1O14786 923 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 GPR37L1O60883 481 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 CLASP2O75122 1294 aaKnown RBP7.99□□□□□ -1.13
VPS52-221ENST00000495755 EFEMP2O95967 443 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 POMCP01189 267 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 ALDH2P05091 517 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 CTSAP10619 480 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 ALADP13716 330 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 HOXB8P17481 243 aaPredicted RBP7.99□□□□□ -1.13
VPS52-221ENST00000495755 COL9A1P20849 921 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 GJB2P29033 226 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 PRPHP41219 470 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 DSC1Q08554 894 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 FAM187BQ17R55 369 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 TMEM31Q5JXX7 168 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 HAUS3Q68CZ6 603 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 SLC27A1Q6PCB7 646 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 ZBTB8OSQ8IWT0 167 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 GSTCDQ8NEC7 633 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 BSNDQ8WZ55 320 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 PRIMPOLQ96LW4 560 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 GAD1Q99259 594 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 POP1Q99575 1024 aaKnown RBP7.99□□□□□ -1.13
VPS52-221ENST00000495755 LRFN3Q9BTN0 628 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 MMTAG2Q9BU76 263 aaKnown RBP7.99□□□□□ -1.13
VPS52-221ENST00000495755 GBP3Q9H0R5 595 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 DDX19AQ9NUU7 478 aaKnown RBP7.99□□□□□ -1.13
VPS52-221ENST00000495755 PRMT7Q9NVM4 692 aaPredicted RBP7.99□□□□□ -1.13
VPS52-221ENST00000495755 MIOSQ9NXC5 875 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 STK39Q9UEW8 545 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 KIAA1024Q9UPX6 916 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 GIT1Q9Y2X7 761 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 HES2Q9Y543 173 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 HCFC2Q9Y5Z7 792 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 STK24Q9Y6E0 443 aa7.99□□□□□ -1.13
VPS52-221ENST00000495755 PP2D1A8MPX8 630 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 ACKR2O00590 384 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 DCXO43602 365 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 LILRB3O75022 631 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 NPTXRO95502 500 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 SRGAP2BP0DMP2 458 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 AKAP5P24588 427 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 MLH1P40692 756 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 NAMPTP43490 491 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 GIT2Q14161 759 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 BMS1Q14692 1282 aaKnown RBP7.98□□□□□ -1.13
VPS52-221ENST00000495755 CBX2Q14781 532 aaPredicted RBP7.98□□□□□ -1.13
VPS52-221ENST00000495755 PTPN14Q15678 1187 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 RILPL1Q5EBL4 403 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 KRT79Q5XKE5 535 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 MCTP1Q6DN14 999 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 LLGL2Q6P1M3 1020 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 DTHD1Q6ZMT9 781 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 CDR2LQ86X02 465 aaPredicted RBP7.98□□□□□ -1.13
VPS52-221ENST00000495755 RNF135Q8IUD6 432 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 COLGALT2Q8IYK4 626 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 SNX29Q8TEQ0 813 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 SLC22A17Q8WUG5 538 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 AUTS2Q8WXX7 1259 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 CASP10Q92851 521 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 ZFP42Q96MM3 310 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 FAM193BQ96PV7 902 aaPredicted RBP7.98□□□□□ -1.13
VPS52-221ENST00000495755 PHF7Q9BWX1 381 aaPredicted RBP7.98□□□□□ -1.13
VPS52-221ENST00000495755 RAB34Q9BZG1 259 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 TRIM6Q9C030 488 aaPredicted RBP7.98□□□□□ -1.13
VPS52-221ENST00000495755 CCDC113Q9H0I3 377 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 C2orf40Q9H1Z8 148 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 BHMT2Q9H2M3 363 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 NXF3Q9H4D5 531 aaKnown RBP7.98□□□□□ -1.13
VPS52-221ENST00000495755 PDZD7Q9H5P4 517 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 POLD4Q9HCU8 107 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 MARCH5Q9NX47 278 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 RAPGEFL1Q9UHV5 662 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 FAN1Q9Y2M0 1017 aa7.98□□□□□ -1.13
VPS52-221ENST00000495755 ZMYM2Q9UBW7 1377 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.97□□□□□ -1.13
VPS52-221ENST00000495755 FAM86C2PA6NEL3 165 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 E9PMD0 336 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 H3BQV1 296 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 N4BP3O15049 544 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 EDN1P05305 212 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 CDC25AP30304 524 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 OR1G1P47890 313 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 SCNN1GP51170 649 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 EFNA5P52803 228 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 ATP2C1P98194 919 aaPredicted RBP7.97□□□□□ -1.13
VPS52-221ENST00000495755 PRPF4BQ13523 1007 aaKnown RBP7.97□□□□□ -1.13
VPS52-221ENST00000495755 CUL4AQ13619 759 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 PPP2R5AQ15172 486 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 MAPK6Q16659 721 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 HERC4Q5GLZ8 1057 aaPredicted RBP7.97□□□□□ -1.13
VPS52-221ENST00000495755 HYIQ5T013 277 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 NT5DC1Q5TFE4 455 aa7.97□□□□□ -1.13
VPS52-221ENST00000495755 TAS1R1Q7RTX1 841 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms