RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 POLR2MP0CAP2 368 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 RLBP1P12271 317 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 ZSCAN20P17040 1043 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-219ENST00000495172 PTGDRQ13258 359 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 PLK5Q496M5 336 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 NOMO2Q5JPE7 1267 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 GPATCH4Q5T3I0 446 aaKnown RBP10.19□□□□□ -0.78
GARNL3-219ENST00000495172 TRMT2AQ8IZ69 625 aaKnown RBP10.19□□□□□ -0.78
GARNL3-219ENST00000495172 TTC8Q8TAM2 541 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 KIF1BPQ96EK5 621 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 AMNQ9BXJ7 453 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 MRPL9Q9BYD2 267 aaKnown RBP10.19□□□□□ -0.78
GARNL3-219ENST00000495172 DUSP15Q9H1R2 295 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-219ENST00000495172 FSCN3Q9NQT6 498 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 SRPK3Q9UPE1 567 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 ADAMTS9Q9P2N4 1935 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 ITPR3Q14573 2671 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 FRMPD4Q14CM0 1322 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 A0A0U1RQF3 1178 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 FAM221BA6H8Z2 402 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 ZBTB42B2RXF5 422 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 ATXN7O15265 892 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-219ENST00000495172 MAP3K13O43283 966 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 ZMYND10O75800 440 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 GABBR2O75899 941 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 PAPLNO95428 1278 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 FCARP24071 287 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 MAPK8P45983 427 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 CLCN3P51790 818 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 HAND2P61296 217 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 IRX4P78413 519 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 SLC5A9Q2M3M2 681 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 LILRA6Q6PI73 481 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 RAB44Q7Z6P3 723 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-219ENST00000495172 HOMER1Q86YM7 354 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 SENP7Q9BQF6 1050 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 MAF1Q9H063 256 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 BRD9Q9H8M2 597 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 SCUBE2Q9NQ36 999 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 CHST12Q9NRB3 414 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 ZDHHC7Q9NXF8 308 aa10.18□□□□□ -0.78
GARNL3-219ENST00000495172 ZFP37Q9Y6Q3 630 aaPredicted RBP10.18□□□□□ -0.78
GARNL3-219ENST00000495172 FLNCQ14315 2725 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 TRIM6-TRIM34B2RNG4 842 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 MAN2B1O00754 1011 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 NRP1O14786 923 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 MEFVO15553 781 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-219ENST00000495172 OFD1O75665 1012 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 SOD2P04179 222 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 RPLP2P05387 115 aaKnown RBP10.17□□□□□ -0.78
GARNL3-219ENST00000495172 ITGB5P18084 799 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 ITPKBP27987 946 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 NLRP11P59045 1033 aaKnown RBP10.17□□□□□ -0.78
GARNL3-219ENST00000495172 TXNDC11Q6PKC3 985 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 ITPRIPQ8IWB1 547 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 METTL13Q8N6R0 699 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 PNMA1Q8ND90 353 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 SPATA18Q8TC71 538 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 PIBF1Q8WXW3 757 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 RABGGTAQ92696 567 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 HERC2P3Q9BVR0 1158 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 RXFP1Q9HBX9 757 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 TCP11L1Q9NUJ3 509 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-219ENST00000495172 PCDHGA5Q9Y5G8 931 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 GON4LQ3T8J9 2241 aa10.17□□□□□ -0.78
GARNL3-219ENST00000495172 PTPRBP23467 1997 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 BCLAF3A2AJT9 711 aaKnown RBP10.16□□□□□ -0.78
GARNL3-219ENST00000495172 PAPSS2O95340 614 aaPredicted RBP10.16□□□□□ -0.78
GARNL3-219ENST00000495172 FGRP09769 529 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 CEBPBP17676 345 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 GDI1P31150 447 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 GLUD2P49448 558 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 KCNC4Q03721 635 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 ODR4Q5SWX8 454 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 USP17L6PQ6QN14 398 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 PCSK4Q6UW60 755 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 PRSS55Q6UWB4 352 aaPredicted RBP10.16□□□□□ -0.78
GARNL3-219ENST00000495172 CAMK1GQ96NX5 476 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 DCBLD2Q96PD2 775 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 PLEKHA4Q9H4M7 779 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 ZNF334Q9HCZ1 680 aaPredicted RBP10.16□□□□□ -0.78
GARNL3-219ENST00000495172 KCNK4Q9NYG8 393 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 DNMT3BQ9UBC3 853 aaKnown RBP10.16□□□□□ -0.78
GARNL3-219ENST00000495172 FAN1Q9Y2M0 1017 aa10.16□□□□□ -0.78
GARNL3-219ENST00000495172 COL5A1P20908 1838 aaPredicted RBP10.16□□□□□ -0.78
GARNL3-219ENST00000495172 THADAQ6YHU6 1953 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 KIF26AQ9ULI4 1882 aaPredicted RBP10.15□□□□□ -0.78
GARNL3-219ENST00000495172 SLC38A8A6NNN8 435 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 ECI2O75521 394 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 C22orf31O95567 290 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 POMCP01189 267 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 PHKA2P46019 1235 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 STAT5BP51692 787 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 TBC1D10CQ8IV04 446 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 GPIHBP1Q8IV16 184 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 SIRT2Q8IXJ6 389 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 LRRC71Q8N4P6 559 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 DNASE1L2Q92874 299 aa10.15□□□□□ -0.78
GARNL3-219ENST00000495172 ZC3H10Q96K80 434 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms