RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 NT5DC3Q86UY8 548 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 GLYCTKQ8IVS8 523 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 RHOT2Q8IXI1 618 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 EIF1ADQ8N9N8 165 aaKnown RBP12.14□□□□□ -0.47
LDHA-211ENST00000494573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■■■ 64.2
LDHA-211ENST00000494573 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 HES6Q96HZ4 224 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 IFT74Q96LB3 600 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 UBE2TQ9NPD8 197 aaPredicted RBP12.14□□□□□ -0.47
LDHA-211ENST00000494573 AMFRQ9UKV5 643 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 SNCAIPQ9Y6H5 919 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 ZSWIM8A7E2V4 1837 aa12.14□□□□□ -0.47
LDHA-211ENST00000494573 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
LDHA-211ENST00000494573 PGRMC1O00264 195 aaKnown RBP12.13□□□□□ -0.47
LDHA-211ENST00000494573 KCNK3O14649 394 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 ZMYND10O75800 440 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 MYBL2P10244 700 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 CNGA1P29973 690 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 ADSSP30520 456 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
LDHA-211ENST00000494573 MFAP3P55082 362 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 CYP24A1Q07973 514 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 PAK2Q13177 524 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 STXBP2Q15833 593 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 CLUL1Q15846 466 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 KRT39Q6A163 491 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 RIOX2Q8IUF8 465 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 CCDC60Q8IWA6 550 aaPredicted RBP12.13□□□□□ -0.47
LDHA-211ENST00000494573 FAM71AQ8IYT1 594 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 GPD1LQ8N335 351 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 FBXO41Q8TF61 875 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 FAM81BQ96LP2 452 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 SH2D3AQ9BRG2 576 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 ISCUQ9H1K1 167 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 KIAA1586Q9HCI6 787 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 XPNPEP1Q9NQW7 623 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 CYP26B1Q9NR63 512 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 ARHGAP28Q9P2N2 729 aa12.13□□□□□ -0.47
LDHA-211ENST00000494573 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
LDHA-211ENST00000494573 TTC7AQ9ULT0 858 aaPredicted RBP12.13□□□□□ -0.47
LDHA-211ENST00000494573 PACSIN2Q9UNF0 486 aaPredicted RBP12.13□□□□□ -0.47
LDHA-211ENST00000494573 GOLGA8IPA6NC78 632 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 GOLGA8JA6NMD2 632 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
LDHA-211ENST00000494573 RTN2O75298 545 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 MTA2O94776 668 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 HEXIM1O94992 359 aaKnown RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 PIGRP01833 764 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 GZMAP12544 262 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 BRDTQ58F21 947 aaPredicted RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 C11orf63Q6NUN7 778 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 SLC39A4Q6P5W5 647 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
LDHA-211ENST00000494573 DAAM2Q86T65 1068 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 CBWD2Q8IUF1 395 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 GSPT2Q8IYD1 628 aaKnown RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 METTL13Q8N6R0 699 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 ZSWIM2Q8NEG5 633 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 SLC35G2Q8TBE7 412 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 HDAC7Q8WUI4 952 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 SHC3Q92529 594 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 CCDC102AQ96A19 550 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.472e-9■■■■□ 20.3
LDHA-211ENST00000494573 POLR3FQ9H1D9 316 aaPredicted RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 PRDM4Q9UKN5 801 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 PPME1Q9Y570 386 aa12.12□□□□□ -0.47
LDHA-211ENST00000494573 MAFBQ9Y5Q3 323 aaPredicted RBP12.12□□□□□ -0.47
LDHA-211ENST00000494573 ANK1P16157 1881 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 PLXNA1Q9UIW2 1896 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 IGKV6D-21A0A0A0MT36 114 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 TMCO5BA8MYB1 307 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 CEP104O60308 925 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 BUB1BO60566 1050 aaPredicted RBP12.11□□□□□ -0.47
LDHA-211ENST00000494573 LRRN2O75325 713 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 SYF2O95926 243 aaKnown RBP12.11□□□□□ -0.47
LDHA-211ENST00000494573 OATP04181 439 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
LDHA-211ENST00000494573 SLC7A5Q01650 507 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 EMC2Q15006 297 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 ALS2CLQ60I27 953 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.11□□□□□ -0.47
LDHA-211ENST00000494573 SND1Q7KZF4 910 aaKnown RBP eCLIP12.11□□□□□ -0.472e-28■■□□□ 11.4
LDHA-211ENST00000494573 ENOSF1Q7L5Y1 443 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 RPUSD2Q8IZ73 545 aaKnown RBP12.11□□□□□ -0.47
LDHA-211ENST00000494573 MREGQ8N565 214 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 NLGN2Q8NFZ4 835 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 SLC20A1Q8WUM9 679 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 POMGNT1Q8WZA1 660 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 ARHGEF26Q96DR7 871 aa12.11□□□□□ -0.47
LDHA-211ENST00000494573 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms