RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, human

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA1-204	ENST00000494467	PPP2R3A	Q06190	1150 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	ADAM9	Q13443	819 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	KYAT1	Q16773	422 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	NELFCD	Q8IXH7	590 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	SYCP3	Q8IZU3	236 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	CCDC155	Q8N6L0	562 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	VTI1A	Q96AJ9	217 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	NLRP4	Q96MN2	994 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	SRRT	Q9BXP5	876 aa	Known RBP	10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	CDHR5	Q9HBB8	845 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	METTL14	Q9HCE5	456 aa	Known RBP	10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	CHST12	Q9NRB3	414 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	SAMSN1	Q9NSI8	373 aa	Known RBP	10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRMT13	Q9NUP7	481 aa	Known RBP	10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	AGPAT5	Q9NUQ2	364 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	LTBP2	Q14767	1821 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	ANKRD63	C9JTQ0	380 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	INO80B-WBP1	J3KQ70	363 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467		M0QZ92	97 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	HNRNPDL	O14979	420 aa	Known RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	N4BP3	O15049	544 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TSPAN1	O60635	241 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	MCF2	P10911	925 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	CKB	P12277	381 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	ARF4	P18085	180 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	SFPQ	P23246	707 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	HOXA11	P31270	313 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	PSMC2	P35998	433 aa	Known RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	LIG4	P49917	911 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	STX17	P56962	302 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	BFSP2	Q13515	415 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	PRPF4B	Q13523	1007 aa	Known RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	KIZ	Q2M2Z5	673 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TCP11X2	Q5H9J9	407 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	FAM47C	Q5HY64	1035 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	FBXO47	Q5MNV8	452 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	SMYD5	Q6GMV2	418 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	MPZL3	Q6UWV2	235 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	NECAB2	Q7Z6G3	386 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRIM59	Q8IWR1	403 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	XXYLT1	Q8NBI6	393 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TMC2	Q8TDI7	906 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TMEM40	Q8WWA1	233 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	NLRP7	Q8WX94	980 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	MFSD14A	Q96MC6	490 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TSPAN18	Q96SJ8	248 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TARS2	Q9BW92	718 aa	Known RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	HAPLN2	Q9GZV7	340 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRPV6	Q9H1D0	765 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	C11orf49	Q9H6J7	331 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	ERVK-5	Q9HDB9	667 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	HSPBP1	Q9NZL4	362 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TBX21	Q9UL17	535 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	CDY2A	Q9Y6F7	541 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	MICAL3	Q7RTP6	2002 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	TET1	Q8NFU7	2136 aa		10.1	□□□□□ -0.79
ABCA1-204	ENST00000494467	SCN5A	Q14524	2016 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467		A0A1B0GTH6	734 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	TTLL13P	A6NNM8	815 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	KCNJ18	B7U540	433 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	GPR182	O15218	404 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	OGT	O15294	1046 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	EXTL3	O43909	919 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	AKAP3	O75969	853 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	SELP	P16109	830 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	NCBP1	Q09161	790 aa	Known RBP	10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	FAAP100	Q0VG06	881 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	KCNJ12	Q14500	433 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	DSC3	Q14574	896 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	DCAF4L1	Q3SXM0	396 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	ATF7IP2	Q5U623	682 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	ARMCX5	Q6P1M9	558 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	INTS8	Q75QN2	995 aa	Known RBP	10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	FAM228A	Q86W67	206 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	RNF214	Q8ND24	703 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	MRFAP1L1	Q96HT8	127 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	OSMR	Q99650	979 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	CBWD1	Q9BRT8	395 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	NOC4L	Q9BVI4	516 aa	Known RBP	10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	IKZF4	Q9H2S9	585 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	PDZD7	Q9H5P4	517 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	USP20	Q9Y2K6	914 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	TTC3	P53804	2025 aa		10.09	□□□□□ -0.79
ABCA1-204	ENST00000494467	GTPBP10	A4D1E9	387 aa	Known RBP	10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	DCDC2C	A8MYV0	355 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	KIAA0355	O15063	1070 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	CLDN3	O15551	220 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	ZNF623	O75123	536 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	ERLIN2	O94905	339 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	CXCL10	P02778	98 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	MYCN	P04198	464 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	EPB41	P11171	864 aa	Known RBP	10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	ATP1A3	P13637	1013 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	RFC2	P35250	354 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	THPO	P40225	353 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	FANCC	Q00597	558 aa		10.08	□□□□□ -0.8
ABCA1-204	ENST00000494467	LPIN1	Q14693	890 aa		10.08	□□□□□ -0.8

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