RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ADGRA1Q86SQ6 560 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 FRAT1Q92837 279 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 IPO9Q96P70 1041 aaKnown RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 PAGR1Q9BTK6 254 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 FOXP3Q9BZS1 431 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 PORCNQ9H237 461 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 SPC25Q9HBM1 224 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 PCDH12Q9NPG4 1184 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 CYP26B1Q9NR63 512 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 MORF4L1Q9UBU8 362 aa6.26□□□□□ -1.41
PTCD3-219ENST00000494323 HERC5Q9UII4 1024 aaKnown RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 GPR55Q9Y2T6 319 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-219ENST00000494323 PFASO15067 1338 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 PLXNB2O15031 1838 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 CCDC163A0A0D9SF12 145 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 AURKAO14965 403 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 TBX1O43435 398 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 BCAR3O75815 825 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 PAPLNO95428 1278 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 MAP4K4O95819 1239 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-219ENST00000494323 GNAI2P04899 355 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 RNASE1P07998 156 aaKnown RBP6.25□□□□□ -1.41
PTCD3-219ENST00000494323 ASNSP08243 561 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 UQCRFS1P1P0C7P4 283 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 MASP1P48740 699 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 MTX1Q13505 466 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 LRRC26Q2I0M4 334 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 LRIT3Q3SXY7 679 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 CCDC158Q5M9N0 1113 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 TTC39AQ5SRH9 613 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 GPR142Q7Z601 462 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 PLEKHH3Q7Z736 793 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 SCUBE1Q8IWY4 988 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 TDHQ8IZJ6 230 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 ARHGAP45Q92619 1136 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 USP6NLQ92738 828 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 EDC3Q96F86 508 aaKnown RBP6.25□□□□□ -1.41
PTCD3-219ENST00000494323 CDC6Q99741 560 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 SLC12A9Q9BXP2 914 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 SENP6Q9GZR1 1112 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-219ENST00000494323 SLKQ9H2G2 1235 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-219ENST00000494323 DHX36Q9H2U1 1008 aaKnown RBP6.25□□□□□ -1.41
PTCD3-219ENST00000494323 DNAJC18Q9H819 358 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 MTMR10Q9NXD2 777 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 BACE2Q9Y5Z0 518 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 ATAD5Q96QE3 1844 aa6.25□□□□□ -1.41
PTCD3-219ENST00000494323 MYO5AQ9Y4I1 1855 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 SURF6O75683 361 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 CPP00450 1065 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 GH2P01242 217 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 SCG5P05408 212 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 SNRPB2P08579 225 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 CT47B1P0C2W7 299 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 PABPC1P11940 636 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 COL6A1P12109 1028 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 TRIM27P14373 513 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 ZKSCAN1P17029 563 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 CDK11BP21127 795 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 CNGA1P29973 690 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 MAPK4P31152 587 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 RGS2P41220 211 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 AMPD3Q01432 767 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 TEKQ02763 1124 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 OS9Q13438 667 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 RAB3GAP1Q15042 981 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 DPY19L1Q2PZI1 675 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 EEF1DP3Q658K8 133 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 RCSD1Q6JBY9 416 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 NSMFQ6X4W1 530 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 ATG4DQ86TL0 474 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 RPUSD2Q8IZ73 545 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 MIGA1Q8NAN2 632 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 KCTD13Q8WZ19 329 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 FCRL3Q96P31 734 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 IER2Q9BTL4 223 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 CCDC8Q9H0W5 538 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 TMX1Q9H3N1 280 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 PIH1D3Q9NQM4 214 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 MBNL3Q9NUK0 354 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 FLRT1Q9NZU1 646 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 ADAMTS6Q9UKP5 1117 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 ZBTB21Q9ULJ3 1066 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 PLAAQ9Y263 795 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 NOP58Q9Y2X3 529 aaKnown RBP6.24□□□□□ -1.41
PTCD3-219ENST00000494323 FLT1P17948 1338 aa6.24□□□□□ -1.41
PTCD3-219ENST00000494323 SMCHD1A6NHR9 2005 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 MYO9BQ13459 2157 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 DDX60LQ5H9U9 1706 aaKnown RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 hCG_2014768A0A024R1R8 64 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 TRBV23-1A0A0A0MS06 115 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 C2orf71A6NGG8 1288 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 STXBP3O00186 592 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 IPO8O15397 1037 aaKnown RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 PRODHO43272 600 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 CNMDO75829 334 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 IDH1O75874 414 aaKnown RBP6.23□□□□□ -1.41
PTCD3-219ENST00000494323 HLA-DOAP06340 250 aa6.23□□□□□ -1.41
PTCD3-219ENST00000494323 GSTM1P09488 218 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms