RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SPATA31D4Q6ZUB0 917 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 APBB1IPQ7Z5R6 666 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 LYSMD2Q8IV50 215 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 CBARPQ8N350 705 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 C1orf162Q8NEQ5 155 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 STAG1Q8WVM7 1258 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 CYFIP2Q96F07 1278 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 IL17RAQ96F46 866 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 C8orf49Q96NF6 230 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 PDCD2LQ9BRP1 358 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 SOX7Q9BT81 388 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 C1QTNF3Q9BXJ4 246 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 KRTAP4-5Q9BYR2 181 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 KLC2Q9H0B6 622 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 PRDM12Q9H4Q4 367 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 MANSC1Q9H8J5 431 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 PARPBPQ9NWS1 579 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 PLA2G3Q9NZ20 509 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 DPP7Q9UHL4 492 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 MYRFQ9Y2G1 1151 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 TSC22D4Q9Y3Q8 395 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 TESMINQ9Y4I5 508 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 ADAMTS20P59510 1910 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 RPTORQ8N122 1335 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 PRR5-ARHGAP8B1AHC4 643 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 XPOTO43592 962 aaKnown RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 LY86O95711 162 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 GAAP10253 952 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 HNRNPLP14866 589 aaKnown RBP eCLIP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 HIBADHP31937 336 aaKnown RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 MSX2P35548 267 aaPredicted RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 MTNR1BP49286 362 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 MAN2A2P49641 1150 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 GZMKP49863 264 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 NEK2P51955 445 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 KRT85P78386 507 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 ATP2C1P98194 919 aaPredicted RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 CDK17Q00537 523 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 HGFACQ04756 655 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 ACAP2Q15057 778 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 ELAVL1Q15717 326 aaKnown RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 TBR1Q16650 682 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 PTPN21Q16825 1174 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 MUM1Q2TAK8 710 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 C19orf54Q5BKX5 351 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 TCTN3Q6NUS6 607 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 BTNL9Q6UXG8 535 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 GAREM2Q75VX8 874 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 TAS1R1Q7RTX1 841 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 KCNK18Q7Z418 384 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 LIMS2Q7Z4I7 341 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 FAM83AQ86UY5 434 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 ZBTB46Q86UZ6 589 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 PNMA8AQ86V59 439 aaPredicted RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 SLC41A1Q8IVJ1 513 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 FUKQ8N0W3 1084 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 SYNE4Q8N205 404 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 DNERQ8NFT8 737 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 PPP1R14CQ8TAE6 165 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 FUBP3Q96I24 572 aaKnown RBP eCLIP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 FAXDC2Q96IV6 333 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 RPL10LQ96L21 214 aaKnown RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 C20orf173Q96LM9 149 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 FDXACB1Q9BRP7 624 aaPredicted RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 GREM2Q9H772 168 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 IFT122Q9HBG6 1241 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 MAN1C1Q9NR34 630 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 LANCL2Q9NS86 450 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 RBM12Q9NTZ6 932 aaKnown RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 TMEM140Q9NV12 185 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 EVLQ9UI08 416 aaPredicted RBP3.13□□□□□ -1.91
LMNB1-207ENST00000494185 GPR45Q9Y5Y3 372 aa3.13□□□□□ -1.91
LMNB1-207ENST00000494185 UBE2QL1A1L167 161 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 KLHL33A6NCF5 533 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 DIRC3C9JPN6 131 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 C1QTNF3-AMACRE9PGA6 284 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 GPR42O15529 346 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ALDH1L1O75891 902 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 S100BP04271 92 aaPredicted RBP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 HLA-DOAP06340 250 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 CT47B1P0C2W7 299 aaPredicted RBP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 U2AF1L5P0DN76 240 aaPredicted RBP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 RBP3P10745 1247 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ALAS1P13196 640 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 OSMP13725 252 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 IL2RBP14784 551 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ACO1P21399 889 aaKnown RBP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 AGXTP21549 392 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ACRV1P26436 265 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 CCT2P78371 535 aaKnown RBP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ADAM17P78536 824 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 U2AF1Q01081 240 aaKnown RBP eCLIP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 CD69Q07108 199 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 MALLQ13021 153 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ZXDCQ2QGD7 858 aaPredicted RBP3.12□□□□□ -1.91
LMNB1-207ENST00000494185 HSP90AB2PQ58FF8 381 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 ZNF585AQ6P3V2 769 aa3.12□□□□□ -1.91
LMNB1-207ENST00000494185 AOPEPQ8N6M6 819 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms