RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 HELQQ8TDG4 1101 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 STAMQ92783 540 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 SPATA32Q96LK8 384 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 CASD1Q96PB1 797 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
UBA3-211ENST00000493957 ELAC1Q9H777 363 aaKnown RBP12.86□□□□□ -0.35
UBA3-211ENST00000493957 DACT1Q9NYF0 836 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 STK17AQ9UEE5 414 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 CCDC39Q9UFE4 941 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 HES2Q9Y543 173 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 PCDHB2Q9Y5E7 798 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 CNTNAP2Q9UHC6 1331 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 LPXNO60711 386 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 NPTXRO95502 500 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 PLS3P13797 630 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 KRT85P78386 507 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 DMP1Q13316 513 aaPredicted RBP12.85□□□□□ -0.35
UBA3-211ENST00000493957 FAM187BQ17R55 369 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 EPC2Q52LR7 807 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 NT5DC1Q5TFE4 455 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 NOTUMQ6P988 496 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 AGMOQ6ZNB7 445 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 DHX58Q96C10 678 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 TRAIPQ9BWF2 469 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 C2orf40Q9H1Z8 148 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 PDZD7Q9H5P4 517 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 KMT5AQ9NQR1 393 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 PRMT7Q9NVM4 692 aaPredicted RBP12.85□□□□□ -0.35
UBA3-211ENST00000493957 ARHGAP28Q9P2N2 729 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 IPPQ9Y573 584 aa12.85□□□□□ -0.35
UBA3-211ENST00000493957 PRUNE2Q8WUY3 3088 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 B4GALT3O60512 393 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 SLC34A2O95436 690 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
UBA3-211ENST00000493957 CTNNB1P35222 781 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 ZNF131P52739 623 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 PRPF4BQ13523 1007 aaKnown RBP12.84□□□□□ -0.35
UBA3-211ENST00000493957 MAPK6Q16659 721 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 CCDC73Q6ZRK6 1079 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
UBA3-211ENST00000493957 TMEM192Q8IY95 271 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 TMEM161BQ8NDZ6 487 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 FIZ1Q96SL8 496 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 APOL6Q9BWW8 343 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 NXF3Q9H4D5 531 aaKnown RBP12.84□□□□□ -0.35
UBA3-211ENST00000493957 ZHX3Q9H4I2 956 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 CWH43Q9H720 699 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 KCND2Q9NZV8 630 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 ODF2LQ9ULJ1 636 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 INPP5FQ9Y2H2 1132 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 PHLPP2Q6ZVD8 1323 aa12.84□□□□□ -0.35
UBA3-211ENST00000493957 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 ACKR2O00590 384 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 POLR2DO15514 142 aaKnown RBP12.83□□□□□ -0.36
UBA3-211ENST00000493957 ZNF623O75123 536 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 FAM13AO94988 1023 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 EOMESO95936 686 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 FOSL2P15408 326 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 CASP1P29466 404 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 NMT1P30419 496 aaKnown RBP12.83□□□□□ -0.36
UBA3-211ENST00000493957 AXLP30530 894 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 PBX3P40426 434 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 RAB27AP51159 221 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 NUCB2P80303 420 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 FAM43BQ6ZT52 329 aaPredicted RBP12.83□□□□□ -0.36
UBA3-211ENST00000493957 SV2BQ7L1I2 683 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 SFR1Q86XK3 245 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 SPIRE2Q8WWL2 714 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 DDX12PQ92771 950 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.361e-7■□□□□ 10
UBA3-211ENST00000493957 CLP1Q92989 425 aaKnown RBP12.83□□□□□ -0.36
UBA3-211ENST00000493957 TMEM117Q9H0C3 514 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 CXCL16Q9H2A7 254 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 IKZF4Q9H2S9 585 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 C17orf75Q9HAS0 396 aa12.83□□□□□ -0.36
UBA3-211ENST00000493957 TYW1Q9NV66 732 aaKnown RBP12.83□□□□□ -0.36
UBA3-211ENST00000493957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.82□□□□□ -0.36
UBA3-211ENST00000493957 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 K7ENM7 598 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 K7ERI5 159 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 TBCAO75347 108 aaKnown RBP12.82□□□□□ -0.36
UBA3-211ENST00000493957 OFD1O75665 1012 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 CSPG5O95196 566 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 MAPTP10636 758 aaKnown RBP12.82□□□□□ -0.36
UBA3-211ENST00000493957 PFKFB1P16118 471 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 IGFBP4P22692 258 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 AKAP5P24588 427 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 ANP32AP39687 249 aaKnown RBP12.82□□□□□ -0.36
UBA3-211ENST00000493957 EFNA5P52803 228 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 NCKAP1LP55160 1127 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 PCBP1Q15365 356 aaKnown RBP eCLIP12.82□□□□□ -0.36
UBA3-211ENST00000493957 TMEM132AQ24JP5 1023 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 ATF7IP2Q5U623 682 aa12.82□□□□□ -0.36
UBA3-211ENST00000493957 SLC27A1Q6PCB7 646 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms