RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 MICU3Q86XE3 530 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 KIAA2013Q8IYS2 634 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 NEK11Q8NG66 645 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 POF1BQ8WVV4 589 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 IWS1Q96ST2 819 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 NAPBQ9H115 298 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 CPVLQ9H3G5 476 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 MAGEF1Q9HAY2 307 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 FAM217BQ9NTX9 383 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 FNDC1Q4ZHG4 1894 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 C17orf102A2RUQ5 167 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 TREHO43280 583 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CSPG5O95196 566 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CPP00450 1065 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 EEF1GP26641 437 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 LMAN1P49257 510 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 TOB1P50616 345 aaPredicted RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 AMPD2Q01433 879 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 AKAP17AQ02040 695 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 DPYDQ12882 1025 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CASP8Q14790 479 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 WTAPQ15007 396 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 ANGPT1Q15389 498 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 STXBP2Q15833 593 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CWF19L1Q69YN2 538 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 MFSD6Q6ZSS7 791 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 RBM23Q86U06 439 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CCDC105Q8IYK2 499 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CMTR2Q8IYT2 770 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 KLHL23Q8NBE8 558 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 VN1R2Q8NFZ6 395 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 RASGRP4Q8TDF6 673 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 C16orf70Q9BSU1 422 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 NUP58Q9BVL2 599 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 TSGA10Q9BZW7 698 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 TLE6Q9H808 572 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 MRPL44Q9H9J2 332 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 RRP15Q9Y3B9 282 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 NR2E1Q9Y466 385 aa11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
PDLIM1-205ENST00000493949 FASNP49327 2511 aaKnown RBP11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 B4E1Z4 1266 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 ENPP3O14638 875 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 CTSHP09668 335 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 AOC1P19801 751 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 KRT2P35908 639 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 ADKP55263 362 aaKnown RBP11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 CDK17Q00537 523 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 UBE3AQ05086 875 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 DUSP6Q16828 381 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 ZNF569Q5MCW4 686 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 RAD9BQ6WBX8 426 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 SPATS2Q86XZ4 545 aaKnown RBP11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 EFCAB13Q8IY85 973 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 CCDC170Q8IYT3 715 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 NSUN6Q8TEA1 469 aaKnown RBP11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 RNPEPQ9H4A4 650 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 EHMT1Q9H9B1 1298 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 ABHD10Q9NUJ1 306 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 COL20A1Q9P218 1284 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 MYO6Q9UM54 1294 aa11.63□□□□□ -0.55
PDLIM1-205ENST00000493949 BAZ2BQ9UIF8 2168 aaKnown RBP11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 DENND4AQ7Z401 1863 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 SHOX2O60902 331 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 DDAH1O94760 285 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 GYPCP04921 128 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 TNNT3P45378 269 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 ADAM17P78536 824 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 ST3GAL2Q16842 350 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 HSDL1Q3SXM5 330 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 USH1GQ495M9 461 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 FIGNQ5HY92 759 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 PAPD7Q5XG87 772 aaKnown RBP11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 SYCE2Q6PIF2 218 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 TRAPPC11Q7Z392 1133 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 ZNF572Q7Z3I7 529 aaPredicted RBP11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 PHKBQ93100 1093 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 TAAR1Q96RJ0 339 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 CUEDC2Q9H467 287 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 GPR179Q6PRD1 2367 aa11.62□□□□□ -0.55
PDLIM1-205ENST00000493949 SOWAHDA6NJG2 315 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 BTBD18B2RXH4 712 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 H3BQF6 201 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 H3BRB1 525 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 PER2O15055 1255 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 KRT86O43790 486 aa11.61□□□□□ -0.55
PDLIM1-205ENST00000493949 IPO7O95373 1038 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms