RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 LINC00301Q8NCQ3 95 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 CLP1Q92989 425 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 ZNF689Q96CS4 500 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 KIFC3Q9BVG8 833 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 PANK2Q9BZ23 570 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 TRIM6Q9C030 488 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 C2orf40Q9H1Z8 148 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 ELAC1Q9H777 363 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 FAM105AQ9NUU6 356 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 CFAP45Q9UL16 551 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 INPP5FQ9Y2H2 1132 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 MRPL42Q9Y6G3 142 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 ZFHX2Q9C0A1 2572 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-222ENST00000493792 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 A0A0U1RQF3 1178 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 M0R296 226 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 B4GALT5O43286 388 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 TBX10O75333 385 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 YEATS4O95619 227 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 PRKCBP05771 671 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 STAT6P42226 847 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 ME1P48163 572 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 RAB27AP51159 221 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 FAM189BP81408 668 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 ADAM15Q13444 863 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 PCBP1Q15365 356 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 CLUL1Q15846 466 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 MAPK6Q16659 721 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 NOTUMQ6P988 496 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 C1orf186Q6ZWK4 172 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 CDR2LQ86X02 465 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 PDILTQ8N807 584 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 LARP4BQ92615 738 aaKnown RBP11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 RAD54LQ92698 747 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 LPPQ93052 612 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 PGBD4Q96DM1 585 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 C11orf84Q9BUA3 381 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 APOL6Q9BWW8 343 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 CCSER1Q9C0I3 900 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 TMEM117Q9H0C3 514 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 KMT5AQ9NQR1 393 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 PRMT7Q9NVM4 692 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 PCDHB2Q9Y5E7 798 aa11.48□□□□□ -0.57
TRAPPC12-222ENST00000493792 K7ERI5 159 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 LINC01565O15544 149 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 PPP6R2O75170 966 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 FAM13AO94988 1023 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 NPTXRO95502 500 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 EOMESO95936 686 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 ARF4P18085 180 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 SLC12A3P55017 1021 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 ZXDAP98168 799 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 RNASELQ05823 741 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 SMAD4Q13485 552 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 PRPF4BQ13523 1007 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 CBX2Q14781 532 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 ATL3Q6DD88 541 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 KCNG4Q8TDN1 519 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 MSLNLQ96KJ4 702 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 POP1Q99575 1024 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 PRRX2Q99811 253 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 TIPINQ9BVW5 301 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 EIF2AQ9BY44 585 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 NFKBIZQ9BYH8 718 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 LMAN2LQ9H0V9 348 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 BLOC1S4Q9NUP1 217 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 TYW1Q9NV66 732 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 USP20Q9Y2K6 914 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 ATP6V1DQ9Y5K8 247 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 MYO15AQ9UKN7 3530 aa11.47□□□□□ -0.57
TRAPPC12-222ENST00000493792 NLRC5Q86WI3 1866 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 LOC730098B7Z3J9 87 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 SLC16A4O15374 487 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 GFRA3O60609 400 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CUTAO60888 179 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 BRD1O95696 1058 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 ITGA4P13612 1032 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 ATF7P17544 494 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 HOXA11P31270 313 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 NPTX2P47972 431 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 EFNA5P52803 228 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 SMTNP53814 917 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 KRT85P78386 507 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 FOXK2Q01167 660 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 MAPK7Q13164 816 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 AMHR2Q16671 573 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 CLLU1OSQ5K130 101 aa11.46□□□□□ -0.57
TRAPPC12-222ENST00000493792 UBXN11Q5T124 520 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms