RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 FBXL18Q96ME1 805 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 NT5C1BQ96P26 610 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 TMEM117Q9H0C3 514 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 WNT8AQ9H1J5 351 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 ZNF112Q9UJU3 913 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 MYPNQ86TC9 1320 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 IGSF9BQ9UPX0 1349 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 SRRM3A6NNA2 597 aaPredicted RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 DDX3YO15523 660 aaKnown RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 LRRN2O75325 713 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 CCNE2O96020 404 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 FGGP02679 453 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 NPTX2P47972 431 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 DRG2P55039 364 aaKnown RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 DLG4P78352 724 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 SPP2Q13103 211 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 BAATQ14032 418 aaPredicted RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 PPP1R2P3Q6NXS1 205 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 LRRC31Q6UY01 552 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 CROCCP2Q86T23 111 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 FBXL13Q8NEE6 735 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 PARD3BQ8TEW8 1205 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 SHC3Q92529 594 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 DHX38Q92620 1227 aaKnown RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 CEP170P1Q96L14 293 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 RNPC3Q96LT9 517 aaKnown RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 MFSD14AQ96MC6 490 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 HINFPQ9BQA5 517 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 AP1M1Q9BXS5 423 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 FAM129AQ9BZQ8 928 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 THAP2Q9H0W7 228 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 OSGEPQ9NPF4 335 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 UVRAGQ9P2Y5 699 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 PARP2Q9UGN5 583 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 ADAMTS5Q9UNA0 930 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 LTBP3Q9NS15 1303 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 ESYT3A0FGR9 886 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 DENND3A2RUS2 1198 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 PODXLO00592 558 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 MYZAPP0CAP1 466 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 PDE6CP51160 858 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 IRAK1P51617 712 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 GUCY2FP51841 1108 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 EIF3BP55884 814 aaKnown RBP10.4□□□□□ -0.74
NPHP3-209ENST00000493732 BPIFB4P59827 614 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 ERVK-9P63128 1117 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 MRPS25P82663 173 aaKnown RBP10.4□□□□□ -0.74
NPHP3-209ENST00000493732 BIRC3Q13489 604 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 DNAJC21Q5F1R6 531 aaKnown RBP10.4□□□□□ -0.74
NPHP3-209ENST00000493732 C1orf220Q5T0J3 134 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 MIS18BP1Q6P0N0 1132 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 KDM7AQ6ZMT4 941 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 RPUSD2Q8IZ73 545 aaKnown RBP10.4□□□□□ -0.74
NPHP3-209ENST00000493732 PPM1KQ8N3J5 372 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 TRIM11Q96F44 468 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 DDX47Q9H0S4 455 aaKnown RBP10.4□□□□□ -0.74
NPHP3-209ENST00000493732 HOXC10Q9NYD6 342 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 MTUS1Q9ULD2 1270 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 ALG6Q9Y672 507 aa10.4□□□□□ -0.74
NPHP3-209ENST00000493732 ATP9AO75110 1047 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 FAM153BP0C7A2 387 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 CHRNA3P32297 505 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 DSG3P32926 999 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 USP8P40818 1118 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 CDR1P51861 262 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 CDR2Q01850 454 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 GCNT1Q02742 428 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 UGCGQ16739 394 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 FAM153CQ494X1 144 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 XKR3Q5GH77 459 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 SEL1L2Q5TEA6 688 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 SNRNP48Q6IEG0 339 aaKnown RBP10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ANO5Q75V66 913 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ZNF677Q86XU0 584 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 SPATS2Q86XZ4 545 aaKnown RBP10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ARHGEF19Q8IW93 802 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 MICALL2Q8IY33 904 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 GPD1LQ8N335 351 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 POMGNT1Q8WZA1 660 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ATG4CQ96DT6 458 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ATP6V1G3Q96LB4 118 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 TEX13BQ9BXU2 312 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 GOLPH3Q9H4A6 298 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ACAD9Q9H845 621 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ATP6V0A4Q9HBG4 840 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 JPH1Q9HDC5 661 aaPredicted RBP10.39□□□□□ -0.75
NPHP3-209ENST00000493732 RAB20Q9NX57 234 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 TMOD4Q9NZQ9 345 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 GABBR1Q9UBS5 961 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 SLC9A2Q9UBY0 812 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 AMACRQ9UHK6 382 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 FAM153AQ9UHL3 310 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 HACL1Q9UJ83 578 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 NOCTQ9UK39 431 aaKnown RBP10.39□□□□□ -0.75
NPHP3-209ENST00000493732 GTF3C4Q9UKN8 822 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 PPP2R3BQ9Y5P8 575 aa10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ZSCAN5CA6NGD5 496 aaPredicted RBP10.39□□□□□ -0.75
NPHP3-209ENST00000493732 ZNF233A6NK53 670 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms