RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 KRT18P05783 430 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 PLS3P13797 630 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 PLCG1P19174 1290 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 NPTX2P47972 431 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 NASPP49321 788 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 BCAR1P56945 870 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 GRIN1Q05586 938 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 RAD51AP2Q09MP3 1159 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 BECN1Q14457 450 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 DHX8Q14562 1220 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 BMS1Q14692 1282 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 KARSQ15046 597 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 TCEAL5Q5H9L2 206 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 SPECC1Q5M775 1068 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 FOXD4L5Q5VV16 416 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 RRAGBQ5VZM2 374 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 ATL3Q6DD88 541 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 KRI1Q8N9T8 703 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 LINC00301Q8NCQ3 95 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 SMG8Q8ND04 991 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 FOXD4L4Q8WXT5 416 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 MRPS27Q92552 414 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 EPSTI1Q96J88 318 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 RUSC1Q9BVN2 902 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 EIF2AQ9BY44 585 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 CCDC113Q9H0I3 377 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 TMEM134Q9H6X4 195 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 KMT5AQ9NQR1 393 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 TLR9Q9NR96 1032 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 LARSQ9P2J5 1176 aaKnown RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 PARP2Q9UGN5 583 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 CFAP45Q9UL16 551 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 ODF2LQ9ULJ1 636 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 LZTS1Q9Y250 596 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 GIT1Q9Y2X7 761 aa7.69□□□□□ -1.18
TOP3A-207ENST00000493648 COL4A4P53420 1690 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-207ENST00000493648 KIAA1671Q9BY89 1806 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 MYH11P35749 1972 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.68□□□□□ -1.18
TOP3A-207ENST00000493648 ARL5CA6NH57 179 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 MEIS3P2A8K0S8 358 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 ZC3H11AO75152 810 aaKnown RBP eCLIP7.68□□□□□ -1.18
TOP3A-207ENST00000493648 PPP6R2O75170 966 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 CSPG5O95196 566 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 POMCP01189 267 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 SCP2P22307 547 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 AKAP5P24588 427 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 DNAJB1P25685 340 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 STRN3Q13033 797 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 CAMK1Q14012 370 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 MCM6Q14566 821 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 DCAF4L1Q3SXM0 396 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 ARSHQ5FYA8 562 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 NT5DC1Q5TFE4 455 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 ATF7IP2Q5U623 682 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 CCDC73Q6ZRK6 1079 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 EP400NLQ6ZTU2 488 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 SV2BQ7L1I2 683 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 GPBP1Q86WP2 473 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 CDR2LQ86X02 465 aaPredicted RBP7.68□□□□□ -1.18
TOP3A-207ENST00000493648 DAW1Q8N136 415 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 SLC39A11Q8N1S5 342 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 MYCT1Q8N699 235 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 SPIRE2Q8WWL2 714 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 LARP4BQ92615 738 aaKnown RBP7.68□□□□□ -1.18
TOP3A-207ENST00000493648 RAD54LQ92698 747 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 TMEM169Q96HH4 297 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 CLIC6Q96NY7 704 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 DCBLD2Q96PD2 775 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 ASB2Q96Q27 587 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 TMEM175Q9BSA9 504 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 TCHPQ9BT92 498 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 KIFC3Q9BVG8 833 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 APOL6Q9BWW8 343 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 MRPL4Q9BYD3 311 aaKnown RBP7.68□□□□□ -1.18
TOP3A-207ENST00000493648 GBP3Q9H0R5 595 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 ZHX3Q9H4I2 956 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 PDZD7Q9H5P4 517 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 IGFLR1Q9H665 355 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 NRDE2Q9H7Z3 1164 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 NGRNQ9NPE2 291 aaKnown RBP7.68□□□□□ -1.18
TOP3A-207ENST00000493648 BLOC1S4Q9NUP1 217 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 TBC1D13Q9NVG8 400 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 HCSTQ9UBK5 93 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 STK17AQ9UEE5 414 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 STK39Q9UEW8 545 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 TNFSF13BQ9Y275 285 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 FAN1Q9Y2M0 1017 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 HES2Q9Y543 173 aa7.68□□□□□ -1.18
TOP3A-207ENST00000493648 NPHP3-ACAD11A0A0J9YXS1 232 aa7.67□□□□□ -1.18
TOP3A-207ENST00000493648 FSD2A1L4K1 749 aa7.67□□□□□ -1.18
TOP3A-207ENST00000493648 NT5C1B-RDH14C9J2C7 533 aa7.67□□□□□ -1.18
TOP3A-207ENST00000493648 INPPL1O15357 1258 aa7.67□□□□□ -1.18
TOP3A-207ENST00000493648 SLC16A4O15374 487 aa7.67□□□□□ -1.18
TOP3A-207ENST00000493648 CUTAO60888 179 aa7.67□□□□□ -1.18
TOP3A-207ENST00000493648 TBCAO75347 108 aaKnown RBP7.67□□□□□ -1.18
TOP3A-207ENST00000493648 DDHD2O94830 711 aa7.67□□□□□ -1.18
TOP3A-207ENST00000493648 FAM13AO94988 1023 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms