RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 TPRP12270 2363 aaKnown RBP14.68□□□□□ -0.06
HDAC3-213ENST00000492506 CCDC195A0A1B0GUA6 201 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 CCDC66A2RUB6 948 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 SPDYE4A6NLX3 237 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 NRP1O14786 923 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 TEX28O15482 410 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 GAS7O60861 476 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 MAFO75444 373 aaPredicted RBP14.68□□□□□ -0.06
HDAC3-213ENST00000492506 PSMD10O75832 226 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 SEC24BO95487 1268 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 ALDH2P05091 517 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 GABPB1Q06547 395 aaPredicted RBP14.68□□□□□ -0.06
HDAC3-213ENST00000492506 XKR3Q5GH77 459 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 LRCH2Q5VUJ6 765 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 CYP26C1Q6V0L0 522 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 TAS1R1Q7RTX1 841 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 GAS2L3Q86XJ1 694 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 RHPN2Q8IUC4 686 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 RIN2Q8WYP3 895 aaPredicted RBP14.68□□□□□ -0.06
HDAC3-213ENST00000492506 ZNF707Q96C28 371 aaPredicted RBP14.68□□□□□ -0.06
HDAC3-213ENST00000492506 RPS6KC1Q96S38 1066 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 INO80BQ9C086 356 aaPredicted RBP14.68□□□□□ -0.06
HDAC3-213ENST00000492506 TBC1D17Q9HA65 648 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 AGPAT5Q9NUQ2 364 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 MARCH5Q9NX47 278 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 CA14Q9ULX7 337 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 ARID2Q68CP9 1835 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 COL4A3Q01955 1670 aa14.68□□□□□ -0.06
HDAC3-213ENST00000492506 CLUHO75153 1309 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 PRPF3O43395 683 aaKnown RBP14.67□□□□□ -0.06
HDAC3-213ENST00000492506 RFPL2O75678 378 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 SOD2P04179 222 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 SRFP11831 508 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 GNA11P29992 359 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 GBP2P32456 591 aaPredicted RBP14.67□□□□□ -0.06
HDAC3-213ENST00000492506 USP11P51784 963 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 UBXN11Q5T124 520 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 KIAA0319Q5VV43 1072 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 PHLDB3Q6NSJ2 640 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 ANO5Q75V66 913 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 CATSPER4Q7RTX7 472 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 DGLUCYQ7Z3D6 616 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 PDCL2Q8N4E4 241 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 RDM1Q8NG50 284 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 GPR152Q8TDT2 470 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 CCDC12Q8WUD4 166 aaPredicted RBP14.67□□□□□ -0.06
HDAC3-213ENST00000492506 NXPE3Q969Y0 559 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 PGBD4Q96DM1 585 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 HERC2P3Q9BVR0 1158 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 TEKT3Q9BXF9 490 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 RXFP1Q9HBX9 757 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 DLL3Q9NYJ7 618 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 FAN1Q9Y2M0 1017 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 NID2Q14112 1375 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 SPTBN2O15020 2390 aa14.67□□□□□ -0.06
HDAC3-213ENST00000492506 STK25O00506 426 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 C2CD2LO14523 706 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 INPPL1O15357 1258 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 DCNP07585 359 aaKnown RBP14.66□□□□□ -0.06
HDAC3-213ENST00000492506 SP9P0CG40 484 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 GLULP15104 373 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 HOXA11P31270 313 aaPredicted RBP14.66□□□□□ -0.06
HDAC3-213ENST00000492506 DNM2P50570 870 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 PUM1Q14671 1186 aaKnown RBP eCLIP14.66□□□□□ -0.06
HDAC3-213ENST00000492506 RNF20Q5VTR2 975 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 DCLK2Q8N568 766 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 URGCPQ8TCY9 931 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 NLRP4Q96MN2 994 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 MINDY3Q9H8M7 445 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 RSAD1Q9HA92 442 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
HDAC3-213ENST00000492506 NOTCH4Q99466 2003 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 POTEMA6NI47 508 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 ANHXE9PGG2 379 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 POMCP01189 267 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 URODP06132 367 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 ADH1AP07327 375 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 MYBP10242 640 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 LAMP2P13473 410 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 AK2P54819 239 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 NUCB2P80303 420 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 NONOQ15233 471 aaKnown RBP eCLIP14.65□□□□□ -0.06
HDAC3-213ENST00000492506 NTRK3Q16288 839 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 Q4G0T1 1027 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 SPECC1Q5M775 1068 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 MIER3Q7Z3K6 550 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 C1orf210Q8IVY1 113 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 COLGALT2Q8IYK4 626 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 MAML2Q8IZL2 1156 aaPredicted RBP14.65□□□□□ -0.06
HDAC3-213ENST00000492506 SUMF1Q8NBK3 374 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 SMG8Q8ND04 991 aaKnown RBP14.65□□□□□ -0.06
HDAC3-213ENST00000492506 BICD2Q8TD16 824 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 STAMQ92783 540 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 PHKBQ93100 1093 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 ARHGEF3Q9NR81 526 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 SLC2A4RGQ9NR83 387 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 KANSL3Q9P2N6 904 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 SIT1Q9Y3P8 196 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 KIF3AQ9Y496 699 aa14.65□□□□□ -0.06
HDAC3-213ENST00000492506 ACACBO00763 2458 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms