RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 RBM19Q9Y4C8 960 aaKnown RBP17.59■□□□□ 0.41
PKP4-214ENST00000492496 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 K7ERI5 159 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 NPTXRO95502 500 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 PLCG1P19174 1290 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 MARCKSP29966 332 aaPredicted RBP17.58■□□□□ 0.4
PKP4-214ENST00000492496 NASPP49321 788 aaPredicted RBP17.58■□□□□ 0.4
PKP4-214ENST00000492496 RASSF8Q8NHQ8 419 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 PABPC5Q96DU9 382 aaKnown RBP17.58■□□□□ 0.4
PKP4-214ENST00000492496 ADPGKQ9BRR6 497 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 NTPCRQ9BSD7 190 aaKnown RBP17.58■□□□□ 0.4
PKP4-214ENST00000492496 KIFC3Q9BVG8 833 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 KMT5AQ9NQR1 393 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 BLOC1S4Q9NUP1 217 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 HES2Q9Y543 173 aa17.58■□□□□ 0.4
PKP4-214ENST00000492496 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
PKP4-214ENST00000492496 ZSCAN22P10073 491 aaPredicted RBP17.57■□□□□ 0.4
PKP4-214ENST00000492496 IRS1P35568 1242 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 TFF2Q03403 129 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
PKP4-214ENST00000492496 KARSQ15046 597 aaKnown RBP17.57■□□□□ 0.4
PKP4-214ENST00000492496 TMEM132AQ24JP5 1023 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 CDR2LQ86X02 465 aaPredicted RBP17.57■□□□□ 0.4
PKP4-214ENST00000492496 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 RAD54LQ92698 747 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
PKP4-214ENST00000492496 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 NXF3Q9H4D5 531 aaKnown RBP17.57■□□□□ 0.4
PKP4-214ENST00000492496 PDZD7Q9H5P4 517 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 ARHGAP28Q9P2N2 729 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 ODF2LQ9ULJ1 636 aa17.57■□□□□ 0.4
PKP4-214ENST00000492496 TCF20Q9UGU0 1960 aaKnown RBP17.57■□□□□ 0.4
PKP4-214ENST00000492496 BRWD1Q9NSI6 2320 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 ARL5CA6NH57 179 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 TTLL13PA6NNM8 815 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 FSCN2O14926 492 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 GALTP07902 379 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 PLS3P13797 630 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 LIG1P18858 919 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 TXLNAP40222 546 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 PBX3P40426 434 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 HYAL1Q12794 435 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 ARSHQ5FYA8 562 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
PKP4-214ENST00000492496 KRI1Q8N9T8 703 aaKnown RBP17.56■□□□□ 0.4
PKP4-214ENST00000492496 LRRC15Q8TF66 581 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 EPSTI1Q96J88 318 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 FAM193BQ96PV7 902 aaPredicted RBP17.56■□□□□ 0.4
PKP4-214ENST00000492496 TMEM175Q9BSA9 504 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 CCDC39Q9UFE4 941 aa17.56■□□□□ 0.4
PKP4-214ENST00000492496 FSD2A1L4K1 749 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 DLL1O00548 723 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 CSPG5O95196 566 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 F13A1P00488 732 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 EDN1P05305 212 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 MLH1P40692 756 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 AFF1P51825 1210 aaKnown RBP17.55■□□□□ 0.4
PKP4-214ENST00000492496 SMTNP53814 917 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 ERVFC1P60507 584 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 RAD51AP2Q09MP3 1159 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 MCM6Q14566 821 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 STK38Q15208 465 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 CTC1Q2NKJ3 1217 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 DCAF4L1Q3SXM0 396 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 LEXMQ3ZCV2 418 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 SPECC1Q5M775 1068 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 NT5DC1Q5TFE4 455 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 ATF7IP2Q5U623 682 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 GPBP1Q86WP2 473 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 ZNF280BQ86YH2 543 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 LINC00301Q8NCQ3 95 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 MICAL1Q8TDZ2 1067 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 LARP4BQ92615 738 aaKnown RBP17.55■□□□□ 0.4
PKP4-214ENST00000492496 TMEM169Q96HH4 297 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 CLIC6Q96NY7 704 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 GAD1Q99259 594 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 APOL6Q9BWW8 343 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 COL25A1Q9BXS0 654 aaPredicted RBP17.55■□□□□ 0.4
PKP4-214ENST00000492496 GBP3Q9H0R5 595 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 NGRNQ9NPE2 291 aaKnown RBP17.55■□□□□ 0.4
PKP4-214ENST00000492496 LARSQ9P2J5 1176 aaKnown RBP17.55■□□□□ 0.4
PKP4-214ENST00000492496 DNAJB4Q9UDY4 337 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 STK17AQ9UEE5 414 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 PRUNE2Q8WUY3 3088 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 TRIP11Q15643 1979 aa17.55■□□□□ 0.4
PKP4-214ENST00000492496 SFI1A8K8P3 1242 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 NT5C1B-RDH14C9J2C7 533 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 H0YCG3 227 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 SLC16A4O15374 487 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 PPP6R2O75170 966 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 DDHD2O94830 711 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 YEATS4O95619 227 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 POMCP01189 267 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 ALDH2P05091 517 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 BMP1P13497 986 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 AKAP5P24588 427 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 DDIT3P35638 169 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 SLC11A1P49279 550 aa17.54■□□□□ 0.4
PKP4-214ENST00000492496 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms